Marinobacter nauticus VT8: Maqu_3642
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Entry
Maqu_3642 CDS
T00454
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03420
Nucleotide excision repair
maq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Maqu_3642
03430 Mismatch repair
Maqu_3642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_3642
Enzymes [BR:
maq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Maqu_3642
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Maqu_3642
MMR (mismatch excision repair)
Other MMR factors
Maqu_3642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABM20711
UniProt:
A1U6U2
LinkDB
All DBs
Position
complement(4025277..4027457)
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AA seq
726 aa
AA seq
DB search
MKPCSMDVSHIIDSLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRMAWLMSVDRVPPT
SILAVTFTNKAAKEMRYRVEQMMQIPTRGLWIGTFHGIAHRLLRSHWKDAGLPENFQVLD
SDDQLRLIKRVMRENRIDESQWPPKQAQWFINSQKDEGLRADHIQENPGDHFTNTMLKIY
RQYEKLCQQGGLVDFGELLLRSHELWLHRPELLSHYQQRFQHILVDEFQDTNTIQYAWLQ
VLASNRVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNSRLVRLEQNYRSTKTILKAAN
SVIANNQGRLGKELWTDGVEGEPISLYAAFNEQDEANYIADSISAWVSEGNLRSECAILY
RSNAQSRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVHYHRDDAAFERVVNIP
TRGIGAKSLQEIREYATGQGISLWESSERLLAAGQVKGRAKTGLQQFMEIINTLSEMAGH
ASLQGLMKQAIESSGLKDYHASEKGEKGQARVENLEELVSALADYDVEEGVDPLAEFIAQ
AALDAGESQADAHEDSVQLMTLHSAKGLEFPMVFLAGVEEGLFPHSMSLEEPGRMEEERR
LAYVGITRAMKKLVLTYAESRRLYGQEKFHALSRFVREIPGDCLQEVRLRNTVTRPAMVE
RPNESLFAQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAY
APLEAC
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttgctccatggatgtctctcatattattgattccctgaacgacgcccagcgc
gaagcggtgacggcgcagaacgaccatttgctggtgctggccggtgccggcagtggcaaa
acccgcgtgctggtgcaccggatggcatggttgatgtcggttgaccgggtgccgcccacg
tccattctggcggtgactttcaccaacaaggccgccaaggaaatgcgttatcgcgtggag
cagatgatgcagattcccacccgtggtctgtggatcggcacctttcacggaattgcccat
cgtttgcttcgttcccactggaaagacgccggcttgccggaaaacttccaggtgttggac
agcgacgaccagttgcggctgatcaagcgagtgatgcgggaaaaccgcattgatgaaagc
cagtggccgccgaaacaggcccagtggtttatcaacagccagaaagatgagggcttgcgg
gcggatcatattcaggagaatccgggcgatcacttcaccaataccatgctgaagatttac
cgccagtacgagaagctctgccaacagggcggcctggtggatttcggtgaactgctgctg
cgttcccacgaactctggctgcatcgtccggaattgctgagtcactaccagcagcgcttc
cagcacatactggtggacgagttccaggacaccaataccattcaatacgcctggcttcag
gtgctggccagcaaccgggtgccgctgacggtggtgggcgatgacgaccagtccatctac
ggctggcggggcgcgaagatcgagaatatccagcagtaccagcgggatttccccaattcc
cggctggtccggctggagcagaactaccgctccaccaagaccattctgaaagccgccaac
tcggtgattgccaacaaccaggggcgtttgggcaaggaactctggactgacggggtggaa
ggtgagccgatcagcctgtacgccgcgttcaacgagcaggatgaagccaattatattgcc
gattccatctcggcctgggtcagcgaaggcaatctgcgcagcgagtgcgccattctctat
cgttccaatgcccagtcccgggtgctcgaagaagccctgatgcgccagggtattccttat
cgagtttacggagggttgcggttctacgaccgtcaggaaatccgaaacgcgctggcttac
ctgcgcctggtgcattaccaccgggacgatgccgcctttgagcgggtggtgaatattccc
acccgcggcattggtgccaagagcctgcaggaaattcgtgaatacgccaccggccagggt
atttccctgtgggaatcgtccgagcggttactggccgcgggccaggtgaagggccgggcg
aaaacgggcctgcagcagtttatggagatcatcaacacgctgtctgaaatggcggggcac
gcgtccctgcaggggctgatgaagcaggcgattgagtccagtggcctgaaggattatcac
gccagtgagaagggcgagaagggtcaggcccgggtggagaacctggaggaactggtcagc
gcgctggcggattatgatgtagaagaaggcgtagatccgctggcggagtttattgcccag
gcggcgctggatgccggcgaatcacaggccgatgctcatgaggacagtgtgcagttgatg
acgctgcattcggccaaggggttggagtttccgatggtgttcctggcaggtgttgaggaa
ggtttgttcccgcacagtatgtcgctggaggagcccgggcgcatggaggaagagcgccgc
ctggcctatgtgggcattacccgggctatgaagaagctggtacttacttacgcggaatcc
cgtcgcttgtatggccaggagaagtttcatgcactgtcccggtttgttcgggagatcccg
ggggattgtctgcaggaggtgcggttgcgtaatacggtgacgcggccggcgatggtggag
cgaccgaatgagagtctgtttgcccaggattcggcccagcagtctggtttcagtctgggc
cagcgggtgcgccatcccaagtttggcgagggaattgtgatgaactccgagggcaccggg
catcacacccgcgtgcaggtgaacttcgatgagggcgccaagtggctggtgctggcttat
gcgcctttggaggcctgttaa
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