Marinobacter nauticus VT8: Maqu_3749
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Entry
Maqu_3749 CDS
T00454
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Maqu_3749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_3749
Enzymes [BR:
maq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Maqu_3749
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Maqu_3749
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Maqu_3749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_TFIIB
PSMbeta
Zn_ribbon_8
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ABM20818
UniProt:
A1U749
LinkDB
All DBs
Position
4158457..4159269
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRQGIAPHCEGQTIQRVIVRNPSLRWPVPADLAEHLEGKTIRAVERRAKYL
FLHLETGSVIVHLGMSGSLRVITDDSPAMTHDHVELVLGNHRRLRFNDPRRFGCWLWTTD
WNRHPLISALGPEPLSEDFNGAWLFRLSRQKQTPVKSFIMDNHVVVGVGNIYANEALFKA
GIHPKRKAGRISLDRYHKLAEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLLVYGK
AGAPCTECNTPLKEIRMNNRSTVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattacctgaagttgaaaccacccgtcagggcatcgcgcctcactgcgaaggc
cagaccatccagcgggtaattgtccgcaaccccagcctgcgctggccggtgccggcggat
ctggccgagcacctggagggcaagaccatccgtgccgtggagcgcagggcgaaatacctg
ttcctgcacctggagactggttccgtgattgtccatctgggcatgtcgggcagtctcaga
gtgatcaccgacgacagccccgccatgactcacgatcacgtcgagcttgtcctcggcaat
catcgccgcctgcgcttcaatgacccgcgacgcttcggctgttggctgtggactaccgac
tggaaccggcatccactgatcagcgcgctcgggccggaacccttatccgaagatttcaac
ggcgcctggctttttcgcctgtcccggcagaaacagacgccggtcaaatccttcattatg
gacaatcatgtggtggtgggcgtgggcaatatctacgccaacgaagccctgttcaaggcc
ggcattcacccgaaacggaaagccggccgcatcagcctggaccgctatcacaagctggcc
gaggccatccgggaaaccctcagcgcagccatactgatgggcggcaccactctgcgggac
ttcgtcaacagcgacggcaaaccggggtatttcgcccagtcgctactggtttatggcaag
gcgggagcgccctgcaccgaatgcaacaccccgctgaaagagatccgcatgaacaaccga
tcgacggtttactgcccccgatgccagcgctga
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