Marinobacter nauticus VT8: Maqu_4200
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Entry
Maqu_4200 CDS
T00454
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maq
Marinobacter nauticus VT8
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maq03032
]
Maqu_4200
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_4200
Enzymes [BR:
maq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Maqu_4200
DNA replication proteins [BR:
maq03032
]
Prokaryotic type
DNA Topoisomerases
Maqu_4200
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Maqu_4200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
DUF5669
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ABM21051
UniProt:
A1U7T2
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All DBs
Position
pMAQU01:complement(96460..98649)
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AA seq
729 aa
AA seq
DB search
MGQILVIVESPAKSKKIQTILGSNYRVAASVGHMRDLPPRDLGVDLETLKPTYVVSEGKS
QVVSNLKRLAGMSDEVILATDPDREGEAIAWHLKVALRLPDDVKRVSYQEITRDAIMKAM
ANPGRIDMKLVAAQESRRVLDRLIGYQVSPALSSKANLSLSAGRVQSVAVKFVVDREREI
QAFQPRGYNVCTLRLAGHPNVSASLDMTPFVPKDERLWKASDAQPFAGPQRVKLVKVEKK
PNAVKPKSAFTTVDLQGVAGKIFGLSAKEVMAAAQTLFEQGLITYHRTDSPNLSDEGIAK
IQSYLSGQGVPIADQVVRHKSKGDAQEAHEAIRPTDVSAATAGQTDTEKNVYSLIRERAM
LSVMPNGIDAVTQYVFQSERRVPGLSGRPVNPMYMAKGSVVQEKGWRAYAKLERIKSKDT
PLPLLEQGRIYDGSVAAVQKTTEPPSRYNEQTLIKALEAKGIGRPSTYAQIMENIKNRSY
IEPKPGSGKSPAFVPGKLGYYIVDALSRFSFMSYTYTRAVEASLDKVARGSMSYVGLVRP
VSDQLTSDIAERLEAESLALKGRCPGCDQPIIQKHRKGSGRGKGRSQGSRAFWVHIDDAH
AAACVQYLNDEHDAPVLPPPEVTSPCPQCQATLIRRYSKTGSRSPYWAHAERGDGDACGV
KFFPDVDGQPVIPEPIPETKCVDCGGIMKKRKNSKTQQPVWVHVAKKPSCGNLFIDDIDG
VPANAAKKA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaatactggttatcgtagagtctccggctaagtccaagaagattcagaccatc
ttgggctcgaactatcgtgtagctgcatctgttgggcatatgcgggatttaccgccccgg
gaccttggtgtggatttggaaacgctcaaacccacttatgtggtatccgaaggtaaatcc
caggtcgtcagcaatcttaaacggcttgccggaatgagtgacgaggtaatccttgctact
gaccctgatcgagagggggaagcgattgcctggcatcttaaagtagcgcttcggttgcct
gatgatgtgaaacgtgtgagctaccaggaaatcacccgggatgccattatgaaggccatg
gccaatccggggcgtattgatatgaagttggtggctgcccaggaaagcaggcgcgttctg
gatcgtctgattggctatcaggtatcccctgccctttccagtaaggcgaacctttccctc
agtgccgggcgcgtgcagtccgttgcggtaaagttcgtggtcgatcgtgagcgcgagatc
caagcatttcagcctcgtggctacaacgtgtgcacgctaagactggccggccatcctaat
gtatctgcttctcttgatatgactcccttcgtcccaaaagatgagcggctctggaaagcc
tcggatgcacagccattcgcagggccgcaacgagtgaaattggtgaaggtcgaaaagaaa
ccaaatgctgttaagccgaagtctgcttttacaacagtcgatctgcagggggttgcgggg
aaaatatttgggctctccgcaaaagaggttatggctgccgcccaaaccctcttcgagcaa
ggtcttatcacctatcatcggacagactcaccaaacctgtccgacgagggtatcgccaag
atccaatcctacctttctggtcagggtgttccgattgctgatcaagtggtaaggcacaaa
tcaaaaggtgatgctcaggaggcccacgaagccatacggcctacggatgtgagcgccgca
actgctgggcaaactgataccgaaaagaatgtctactccttaattcgggagcgggccatg
ctgagtgttatgcccaatggcatagatgccgtcactcaatatgtcttccagtccgagcgt
cgagtgccaggtttaagtggtcggccggtgaatcccatgtatatggcaaagggaagcgtt
gttcaggaaaaggggtggcgcgcctacgcgaagcttgagcgaatcaaatcaaaagacaca
cccctgccgttgcttgagcaaggtcgcatctatgacggttccgtggcggcggtccagaaa
acgacagagccaccgtcacgatataatgagcagaccttaattaaggcgctggaggcgaaa
gggattgggcgtccttcaacctacgcacagatcatggagaacattaagaatcgctcttac
atcgagcctaaacccggctctgggaagtctcccgcctttgtcccgggtaagctgggatac
tacatcgttgatgccctgtctcgctttagctttatgagctacacctatacccgtgctgtc
gaggcatctctggacaaggtggcccgaggttcaatgtcctacgttgggcttgtccgtccc
gttagtgaccaacttacctctgacattgcagagcgtcttgaggctgagtcattagcgctg
aaaggccgctgcccgggctgcgatcagcccatcatccaaaagcaccgcaaaggttccggc
cgtggcaaggggcggtctcaaggctcgcgggcgttctgggtacacattgatgacgctcat
gcagctgcttgcgttcagtatctcaacgatgagcatgatgccccagtccttccccctcca
gaggtaacatccccttgccctcagtgtcaggcaactctaatccgtcgttacagcaagacg
ggtagtcgctcaccgtactgggcacatgccgaacgcggggatggagatgcttgcggagta
aaattcttccccgatgtggacggtcagcccgtaatccccgaaccaatcccagagactaag
tgcgtagattgcggcgggatcatgaagaaacgtaaaaactccaagacgcaacagccggta
tgggttcatgtggcgaaaaagccttcctgcggaaacttattcattgatgacattgatggg
gtgccggcgaatgctgcgaagaaagcgtag
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