Marinobacter nauticus VT8: Maqu_4283
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Entry
Maqu_4283 CDS
T00454
Name
(GenBank) phosphoesterase, RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03410
Base excision repair
maq03430
Mismatch repair
maq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Maqu_4283
03430 Mismatch repair
Maqu_4283
03440 Homologous recombination
Maqu_4283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_4283
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Maqu_4283
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Maqu_4283
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Maqu_4283
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
STAT_int
Motif
Other DBs
NCBI-ProteinID:
ABM21134
UniProt:
A1U815
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All DBs
Position
pMAQU01:198002..199984
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AA seq
660 aa
AA seq
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MNTASTSQTESAGLPPQSREIVTTGPAVENPAVRQLKEHIFANRGASYPETYHPKHLVSP
TLLTDALKAAVRLSDALLEGQTIICVADFDCDGATGAAIFNRCMKRFADTLAAFRMPKAS
LHTVIPDRFRYGYGLKPRLAEDKIKPLYPDVIVTIDNGISSHDAVTRISQWQGVSSANPN
GAPDVIITDHHAQGETLPTAFAVVNPNRKDCPFPSKALAGCGVAFYMMLLVRQTLISRLK
RNSRTSAAAGGIAAVQINHFADLVAVGTIGDMVPMDLNNRIMVKVGLDRINKGLQMPARK
AHLDGYLSFGVRALLEAANVSYPVTASDIAFQVVPRINAVGRLETPTAGIECLLSETQMM
AGIEADRCHKLNEERKSVQRTMQQEADEALASLSDTPDTETPCVVLHNPSWHPGIVGLVA
SGIKERTKGAVICFAPEGDPNAKPGTPEADGDPDWLKGSGRSDNVHLRDTLAFVAAQAPD
LMMQFGGHARAAGLSLHKTELNRFKRLFAKAVEHSLTAAPLVNPVYADGALPAHLRDHAF
AAWIERQPWGNLFPEPTFTQNFKVIRAAGVGTAHQKLLVMDADEQPLSNTDQNGTTIYPV
SHGAKAIPMLWFFSRDEENPDTVAPGSAVRVTYTLTINRFRGQNEIQAIAKSIDIIGVGQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcatcaacaagccaaaccgaatcggccgggcttccccctcagagcagagaa
atcgttacgactggcccagccgtggaaaatccggccgtccgccagctcaaggaacacatt
ttcgctaatcggggtgccagctaccctgagacctaccatccaaagcacctggtcagcccc
acccttttgacggatgccctgaaagcagcagttcggttatccgatgctttactggaaggc
cagaccatcatttgcgtagccgactttgattgcgacggagcgaccggtgccgcgattttc
aaccgatgcatgaaacggtttgccgataccctggcggccttccgaatgcccaaggcaagc
ctgcacactgttattcctgaccgcttccgttatggctacggtctgaagccccggctggcg
gaagacaaaatcaagccgctgtaccccgatgtgattgtcacaattgataacgggatttcc
tctcatgatgcggtcacccgaatctcgcaatggcaaggtgtaagcagcgctaatcccaat
ggggcgcccgatgtgatcattaccgatcaccacgcccagggcgaaaccctccccaccgcc
ttcgccgtggtcaacccgaacagaaaggattgcccgtttccctccaaggcgttggccgga
tgtggcgtggccttctatatgatgctcctggttcgccaaaccctgatcagccggctgaag
agaaacagtcgcacctcggccgcagcgggagggatcgctgccgtccagatcaaccatttt
gccgacctggtggccgttggcacgatcggggatatggttccgatggatttgaacaaccgg
atcatggttaaggtgggcctggaccggatcaacaaggggctccaaatgccggcacggaaa
gcccacctcgacggctacctctcctttggcgtccgcgccctgctggaagcggccaacgta
agctacccggtgaccgccagcgacatcgccttccaggtggtacccagaattaatgcggtt
ggccgactggaaaccccaaccgccggtattgagtgcctgctttccgaaacacagatgatg
gccggcattgaggcagaccgatgccacaagctgaacgaagaaagaaaatcggtgcaacgg
acgatgcaacaggaagccgacgaggccttggccagtctgagcgacaccccggacaccgaa
acgccgtgcgtggttctccacaacccgtcatggcatccgggcattgttggattggtggct
tcgggcattaaggagcgaacgaaaggtgcggtaatctgcttcgccccggaaggtgaccca
aacgcaaaacctggaacgccggaggcagacggtgaccctgactggctcaaaggctctggc
cgctctgacaacgtgcaccttcgagacacgctggccttcgttgcggctcaggccccggat
ctgatgatgcagttcggcggtcacgctcgggcagcaggcctgtccttacacaaaacagag
ctcaaccggtttaagcgtctgtttgcgaaagcggtcgaacactcccttacggcagcccct
cttgtaaatccagtgtatgccgatggcgcacttccggcacaccttcgagatcacgcgttt
gccgcctggattgaacgccagccctggggcaacctgtttcccgagccaacctttacccag
aacttcaaagtcattcgggcagccggagtgggaacggcccaccagaaactactggttatg
gatgccgacgagcagccactgagcaacaccgatcagaacggcacaacgatttacccggtc
tcccatggcgccaaggctatcccgatgctttggtttttcagccgagacgaggaaaacccg
gatacggtggctcctgggtctgcagttcgggtgacctacactctgacgatcaaccgcttt
cgggggcaaaacgaaatccaggcgatagcaaaatccatcgacatcataggggtcggccaa
taa
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