Marinilongibacter aquaticus: LAG90_03645
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Entry
LAG90_03645 CDS
T08477
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
maqa
Marinilongibacter aquaticus
Pathway
maqa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maqa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAG90_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maqa03021
]
LAG90_03645
03400 DNA repair and recombination proteins [BR:
maqa03400
]
LAG90_03645
Enzymes [BR:
maqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAG90_03645
Transcription machinery [BR:
maqa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAG90_03645
DNA repair and recombination proteins [BR:
maqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAG90_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UBM59742
LinkDB
All DBs
Position
complement(826502..827491)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVMEKADDFHGFFEFKPLEKGYGVTIGNALRRILLSSLEGYAITAVRFP
GVLHEFSSIEGVVDDVTEIILNLKQVRFKKVSDYVDNKISVKVKNQTELTAGDIAKFTQS
FEILNPELVIARLDSKKELEFEVVVDKGRGYVASEEQKNNDLPVGFIAVDSIYTPIKNVK
FTVENTRVEQRTDFEKLLLEIKTDGSIHPEKALQESANILIQHFLKFTDENMVFDTTGDD
ANEMVDEEFLHMRKLLKTSLQDLDLSVRAYNCLKSADIRTLGDLTRLEVADMMKFRNFGK
KSLTELEQLVAEKGLHFGMDVSKYKLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcatttcaaatgcccgataaggtcgtcatggagaaagctgacgacttc
catggtttttttgagtttaaaccacttgaaaagggttatggggtaaccatagggaatgct
ttgcgtcgaattttgctctcttcgctcgaagggtacgcaatcacggccgtaaggtttccg
ggtgttctccatgaattttcatcgatagaaggtgttgtagatgatgtcactgagatcatt
ttgaatctgaaacaagtaagattcaaaaaggtatctgactatgtagataataaaatatcc
gtcaaagttaaaaatcaaactgagcttacagctggcgatatcgccaagtttacgcaaagt
tttgaaatcctgaatccagaacttgtaatcgcccgattggactccaaaaaagaattggaa
ttcgaagttgtggtagacaagggcagaggctatgtggcttctgaagagcaaaagaacaac
gatttgccagttggttttatcgctgtagattcaatttacacgccgatcaaaaacgtgaag
ttcactgtggaaaacacacgtgtggaacaacgtaccgacttcgaaaaattgcttttggaa
attaaaaccgatggttcgatccatccggaaaaagctcttcaagaatcggccaatatcttg
atccaacacttcttgaaattcaccgacgaaaacatggtgttcgataccactggcgacgac
gccaacgaaatggtggatgaagaattcttgcacatgcgtaagttgttgaaaacttcattg
caggatttggatctttctgtgcgtgcgtacaattgcttgaaatctgcggatatccgtact
ttgggcgatttgacacgtttggaagtggccgatatgatgaaattcagaaactttggtaag
aagtcgcttacagaattggagcaacttgtagccgagaaaggtctgcatttcggtatggat
gtatcgaaatacaaattggacgaagattaa
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