Marinilongibacter aquaticus: LAG90_06350
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Entry
LAG90_06350 CDS
T08477
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
maqa
Marinilongibacter aquaticus
Pathway
maqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAG90_06350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maqa03019
]
LAG90_06350
03009 Ribosome biogenesis [BR:
maqa03009
]
LAG90_06350
Enzymes [BR:
maqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LAG90_06350
Messenger RNA biogenesis [BR:
maqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LAG90_06350
Ribosome biogenesis [BR:
maqa03009
]
Prokaryotic type
rRNA helicases
LAG90_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
CMS1
AAA_19
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
UBM60262
LinkDB
All DBs
Position
1427151..1428827
Genome browser
AA seq
558 aa
AA seq
DB search
MQTVKFNELPVSDYILQAVEEMGWENASPIQSQAIPAVLNGRDVIGQAQTGTGKTAAFGI
PAIESVDVDHKATQVLILCPTRELALQVKEQMYLLSKYKKGLLVTCIYGGESYERQFRDL
KRGAHIVVGTPGRIMDHLDRKTLQLSDLKMMVLDEADEMLNMGFREDIETILSQAPEERQ
TVLFSATMSKEILSITKRFQNDPHIIKVTREEVTNDNIEQLVFNVRRDAKTEAMCRLIDV
HNLKLILVFCNTKSKVDEVAMELQARGHAAEGLHGDLRQGARTQVMNKFRNGNCNILVAT
DVAARGIDVNDVDAVFNYDVPMDLENYVHRIGRTGRAGKKGMAFTLAPNRDNGKLRDLER
YTKVKIEQGKIPTLDDLKEVKRKQFKEKVISHISDQNIDEFADIINEMIDEGHDPDHILT
ALVKMQIGSLEIGSNFEDDLSDKRKARGERRSEGRRGSRNEQGDDRRGGRRNNKGQGSGE
AGMVRLFINLGKKDHVSPNHIVGAIAAESKIPGRVIGQIDMYDKFSFVEVPERDVNRVLS
GMKGKTINAREAAIEVAK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagttaagttcaatgaacttcctgtgtctgactatatccttcaggcagtggaa
gaaatgggttgggaaaacgcttcaccgatccaaagtcaggcaattccagcggtgctcaat
ggacgcgatgtcatcggtcaggcccaaactggaacagggaaaacagccgccttcggcatt
ccggcaattgaatcggtagatgtggatcacaaagccacccaagtattgatcctttgccct
actcgcgagttggctcttcaagtgaaagagcagatgtacttgctttcgaaatacaaaaag
ggtcttttggtaacctgtatatatggtggtgagtcgtatgaacgacaattccgcgatttg
aaacgcggagcacatatcgtggtgggtacgcctgggcgtatcatggaccacttggaccgc
aaaaccttgcaattgagcgacctaaaaatgatggtgctcgatgaagccgacgaaatgttg
aatatgggtttccgcgaagacatcgaaaccattttgagccaagctcccgaagaaagacaa
actgtgctcttttcggccacaatgtccaaagagattttgagcatcaccaagcgtttccaa
aatgatccgcatatcattaaagtgacacgtgaagaagtgaccaacgacaacatcgagcag
cttgtgttcaatgtgcgtcgcgatgccaaaaccgaagccatgtgccgtcttatcgatgtg
cacaatttgaaattgatccttgtattctgtaataccaaatcgaaggtagacgaggtggcc
atggaattgcaagcccgcggacatgccgccgaaggacttcacggcgaccttcgccaagga
gctcgtacacaggtgatgaacaaattcagaaacggaaactgcaatatccttgtcgccacc
gacgtggccgctcgcggtatcgatgtgaatgatgtggatgcagtgttcaactacgacgta
cccatggatttggaaaactatgtacaccgtatcggacgtacaggacgggccggcaagaaa
ggaatggctttcacattggcaccaaaccgcgacaacggtaagcttcgcgacttggaacgc
tacacgaaagtaaaaatcgagcaaggtaaaatccctacactcgacgatttgaaagaggta
aaaagaaagcaattcaaagagaaagtgatttcacatatctctgatcaaaatatcgatgaa
tttgcagacatcatcaatgaaatgatcgatgaagggcacgatccggatcatatccttacg
gctttggtcaaaatgcaaatcggctctttggagattggctcaaacttcgaagatgatctt
tccgacaaaagaaaagcccgtggcgagcgtcgttctgaaggacgaagaggctcgcgtaac
gagcaaggcgacgaccgtcgcggtggacgtagaaacaataagggccaaggcagcggtgaa
gctggaatggtgcgtttgttcatcaatcttggaaagaaagaccatgtatcgcccaaccac
attgtgggtgccattgcagccgagtcgaaaatccccggtcgcgtgattggccaaatcgac
atgtacgacaaattcagctttgtagaagtgcccgaacgtgatgtaaatcgcgtactttca
ggcatgaaaggcaagaccatcaatgctcgtgaagccgcgatagaggtagccaaataa
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