Marinilongibacter aquaticus: LAG90_08335
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Entry
LAG90_08335 CDS
T08477
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maqa
Marinilongibacter aquaticus
Pathway
maqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAG90_08335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maqa03019
]
LAG90_08335
03400 DNA repair and recombination proteins [BR:
maqa03400
]
LAG90_08335
Enzymes [BR:
maqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAG90_08335
Messenger RNA biogenesis [BR:
maqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LAG90_08335
DNA repair and recombination proteins [BR:
maqa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAG90_08335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UBM60647
LinkDB
All DBs
Position
complement(1893235..1895514)
Genome browser
AA seq
759 aa
AA seq
DB search
MEKPIEEKLKKNLKEIFGFDKFRGQQDAIIHSIIDGNNTFVIMPTGAGKSLCYQLPAISL
EGTAVVISPLIALMKNQVDQMKGFGINAQFLNSTLNKTEMNRVKKGVLEGECKLLYIAPE
SLTKEDNLVFLKQANLSFVAVDEAHCISEWGHDFRPEYRKIRSIIESIDERLPIIALTAT
ATPKVQMDIKKNLNMDDSTLFKTSFNRANLYYEVRPKKNPKKQLLQFISSHKGKSGIVYC
LSRKKVEEIASLLSVNGVKALPYHAGLDADVRMKNQDAFLNEACDVVVATIAFGMGIDKP
DVRFVVHYDAPKSLEGYYQETGRAGRDGLDGHCLMFYAYDDVLKLEKFNKDKTVTERDNA
KALLMEIVAYSTLGVCRRRQLLSYFGEFMNENCGFCDNCKKPTKTFQVEKEAVLGMQAML
ATEERFSIQHIADMLTANTANNDYIVSYGHDKLPQYGEGLKYFKQKEVVFKPKGKNADKE
EQEEYTVTDKWVSVLRQLLVYGFIEKDIDNYGVVKLTAKGKKYLEDPYKIEMYDDHDLSE
AEGSRDDDIQTSAPGGSGGAADEALLEMLKALTKKIGKQQGIPHYAVFQEPSLQEMATTY
PTSMDALTQIQGVGQGKARKFGKPFIDLVSKYVKDNDIETTEDFVVKTAVNKSKTKIFII
QQVDRKVSLDEIAESKGISFDELLGEIENICYSGTKLNLDYYINGEIDEDKQDDIYDYFM
NAESDNIRLALADFEDYEDEVTEEELRLMRIKFLSEVAN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaccgatagaagaaaaactgaaaaagaatctcaaagagatttttggattcgat
aaattcagagggcagcaggatgcaatcattcacagcataatagacggtaacaataccttc
gtgatcatgcccaccggagcgggcaaatccttgtgttatcaattgccggccatttctttg
gaaggcactgccgttgtgatcagtcctttgatcgcattgatgaaaaaccaagtagatcag
atgaagggttttggcatcaacgcccagtttttgaactctactttgaataaaacagaaatg
aaccgggtgaaaaagggtgtgctcgaaggcgagtgcaaattgctctacatcgctccggaa
tcattgacgaaagaagacaacctggtcttcttgaaacaagccaatctttcttttgtggct
gtagatgaggcccactgtatatccgagtgggggcacgatttccgcccagaataccgcaag
attcgcagcatcatcgaaagcattgatgaaaggctgccgatcattgccttgactgccacg
gccacgccaaaagtgcagatggacatcaagaagaatctgaatatggacgattctactttg
ttcaaaacttcgttcaatagagcgaatttatattacgaagtacggcccaagaaaaacccg
aagaagcaattgcttcagttcatcagttcgcacaagggcaaaagcggaatcgtatattgc
ttaagcagaaagaaagtggaagaaatcgccagtttgctttcggtgaatggcgtgaaggcc
ttgccttatcatgcaggtttggatgccgacgtgcgaatgaaaaaccaagacgctttcctg
aacgaagcttgcgatgtagtggtggcgactatcgctttcggaatgggaattgataagccc
gatgtgcgttttgtagtgcattacgatgctccgaaatcattggaagggtattatcaggag
actggccgtgcgggtagagatggtttggatgggcattgccttatgttctatgcctacgac
gacgttttgaagttggagaaattcaacaaggataaaaccgtaaccgaacgcgataatgcc
aaggctttgctgatggaaatcgtggcgtactcgactttgggtgtgtgccgaagaaggcaa
ttgctcagctattttggcgagtttatgaatgagaattgtggtttttgtgataactgcaag
aaacccacaaagactttccaagtggaaaaagaggctgttttgggcatgcaagccatgctg
gccactgaagagcgtttctctattcagcatattgccgatatgttgacggccaatacggcg
aacaatgattacatcgtaagctacggtcacgataagctgcctcaatatggagaaggcctg
aagtatttcaagcaaaaagaggtggttttcaagccgaaaggcaaaaatgccgacaaagaa
gagcaggaagaatataccgtaaccgacaaatgggtttcggtgttgcggcaattgctggtt
tacggcttcatagaaaaggatatcgataattacggggtggtgaaattgactgcaaagggc
aagaaatacctcgaagatccttataaaattgaaatgtacgacgaccacgacctttccgag
gccgagggcagtcgagacgacgatattcagacttcggccccgggtggttctggaggagcg
gccgacgaggctttgctcgaaatgctgaaagctctgacgaagaaaatcgggaagcagcag
ggcataccgcactatgcggttttccaagagccctcgcttcaagaaatggccactacgtat
cccacttcgatggacgccttgacgcagattcaaggtgtggggcaaggaaaggcccgcaag
tttggaaaaccttttatcgatttggtttcgaagtatgtgaaagacaacgacatcgaaact
acggaagattttgtcgtgaaaacggcagtgaacaagtcgaaaactaaaatcttcattatt
cagcaagtggatcgaaaagtgagcctcgatgaaattgcggaatcgaaagggattagtttc
gatgaattgctcggcgaaatcgaaaacatttgctactcaggcacaaaactcaatctcgac
tattacatcaatggcgaaattgatgaagacaaacaggacgacatctatgattatttcatg
aatgccgaatcagacaacattcgtctggccttggctgattttgaagattacgaagatgaa
gtgaccgaagaagaactgcgtcttatgcgaatcaaattcttgagtgaagtagcaaactga
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