Marinilongibacter aquaticus: LAG90_19235
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Entry
LAG90_19235 CDS
T08477
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
maqa
Marinilongibacter aquaticus
Pathway
maqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAG90_19235 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maqa03019
]
LAG90_19235 (rny)
Messenger RNA biogenesis [BR:
maqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAG90_19235 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
UPF0154
KH-I_KHDC4-BBP
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
UBM58935
LinkDB
All DBs
Position
complement(4486161..4487726)
Genome browser
AA seq
521 aa
AA seq
DB search
MSEYVMLIVGVLAGLAVGYFIGQSLMKKKVQDHEGIAKKEAEKIIKEAEQTGESIKRDKK
LEAKEHFLKLKSDFEEDSSKKKNIILQNEQKVKQMQNQAAQMLEKNKREQSEIQSLKDKL
GHQLEIASKRKEEAEKMHQQQVEQLESISGLSAEQAKEQLINALRAEAESKASAIVKQSI
EEAKLSATKEAKKIVIQTIQRTAAEQAIENCVSVFNIESDEIKGKIIGREGRNIRALEAA
TGAEIIVDDTPEAIVISSFDPVRREVTRLSLHRLVQDGRIHPARIEEVVNKTRKEINNEI
IEIGERTVLDLGIHGLHPELIKLVGRMRFRSSYGQNLLQHSREVAKLCATMAAEMGFNVK
LAKRAGLLHDIGKVYQEESDLPHAILGMELAKKYKEHTDVCNAIGAHHDEIEMTSLISPI
IQVCDAISGSRPGARREMMNSYVQRLQDLEDLALAFEGVEKCYAIQAGRELRVIVDAENV
NDEKAGMLSFNISQKIEKEMQYPGQIKVTVIREMRSVAYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatatgttatgttaattgtcggtgtgctggcgggtctggctgtcggctatttc
attggccagtcgctgatgaaaaagaaggtgcaagaccatgaaggtatcgccaaaaaagaa
gccgagaagataatcaaagaagccgaacaaaccggtgaaagcataaagcgtgataaaaaa
ctggaagccaaagaacactttttgaaactgaaatcagatttcgaagaggacagttcgaag
aagaaaaacatcattttgcagaatgagcaaaaggtgaagcagatgcaaaatcaagccgcc
caaatgcttgagaaaaacaaacgcgaacaaagtgaaatccaatcgctgaaagacaaactt
ggccaccaattggaaatcgcctcaaaacgcaaggaagaagcggaaaagatgcatcagcaa
caagtggaacaactggaaagtatttctgggctttcggccgaacaagccaaagagcaattg
atcaatgccctcagagctgaagccgaatccaaagcttctgccatcgtgaaacaaagcatc
gaagaggccaagttgtctgccacgaaagaggccaagaaaattgtcattcaaaccattcaa
cgtacagcagccgagcaagcgatagaaaactgtgtatctgttttcaatatcgaaagtgat
gaaataaaaggtaaaatcattggtcgtgaaggccggaatatccgtgccctagaggctgcc
actggtgcagaaattattgtagacgatactccagaagccatcgtcatttccagcttcgac
cctgttcgcagagaagtgactcgcctttcattgcacagacttgtacaagacggccgaatt
caccccgctcgcattgaagaggtggtgaataagacccgtaaagaaataaacaacgagatt
atcgaaatcggtgagcgtacagtgctcgatttgggtattcacggcctgcatccagaattg
ataaaactggttggtcgtatgcgtttccgttcttcttacggacaaaaccttttgcaacac
tcgcgtgaagtggccaaattgtgtgccactatggctgccgaaatgggcttcaatgtgaaa
ctcgccaaaagagccggacttctccatgacatcggtaaagtgtatcaggaagaatctgat
ttgccgcacgccattttgggtatggaattggcgaagaaatacaaagaacacaccgacgtg
tgtaatgcaattggtgctcaccacgacgaaatcgaaatgacttccttgatctcgcccatt
attcaagtgtgcgatgccattagcggttctcgtcctggggctcgtcgcgagatgatgaac
tcctatgtacagcgtctccaagatttggaagatttggccttggcttttgaaggtgtggaa
aaatgttacgctatccaagcaggtcgtgagttgcgtgtgattgtggacgccgaaaatgta
aacgatgaaaaagcaggtatgctttcctttaacatttcgcagaagatcgagaaagaaatg
caataccctggtcaaatcaaagtaacggtgatccgtgagatgcgttcggttgcttacgct
aaataa
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