Methanofollis aquaemaris: RJ40_02660
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Entry
RJ40_02660 CDS
T08618
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
maqe
Methanofollis aquaemaris
Pathway
maqe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maqe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RJ40_02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maqe03019
]
RJ40_02660
03009 Ribosome biogenesis [BR:
maqe03009
]
RJ40_02660
Enzymes [BR:
maqe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RJ40_02660
Messenger RNA biogenesis [BR:
maqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RJ40_02660
Ribosome biogenesis [BR:
maqe03009
]
Prokaryotic type
rRNA helicases
RJ40_02660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QSZ66477
UniProt:
A0A8A3S2A7
LinkDB
All DBs
Position
complement(564108..565718)
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AA seq
536 aa
AA seq
DB search
MQEYCGFSSFPISPNILKAIEDMGFEEPTPIQKLAIPQILEGKDVTGQAQTGTGKTAAFG
IPLVEKISPEDPRTQALILSPTRELALQTSGEIKRLSRHQGNLSVVPIYGGQPIGRQFGA
LRHGAQIIVGTPGRVIDHLERGTLSLDAVQTVVLDEADQMLDMGFREDIERILSETPEDR
QTVLFSATMPGPIRDISRRFQRDPAFVRVQQKEMTVPQVEQLSVTVRGREKPEVLSMLLQ
IYNPELTIVFCNTKQGVDDLTTQLHTLGVRAEALHGGMKQVQRDRVMGRFRNDAIDVLIA
TDVAARGIDVEDVELVINYDLPQDIEYYIHRIGRTARAGRGGRAITFVGPRDGYRLRAIQ
RHSRARIHNLPVPTKRDVEESRMRNLAEKVRQTIEEGDLDRYAGIVDRVIGEDDLSAQDV
AAALLKMMLSHGTTRPKSTAAEPEDRGEVEVGMTRLHLNAGKDRNIRPKDIVGALAGETG
IPGRSIGAIRIEDNNTFVEVPEESAKTIVERMKGKSIGSVRLIGGTCLTIATPTNR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatattgtggcttctcaagttttcccatctccccgaatatcctcaaggcaata
gaagatatgggctttgaggagccaacacctatccagaaactcgctatccctcagatcttg
gaaggaaaggacgtgaccggtcaggcccagaccggtactggcaagacggcggcattcggg
attccgctcgtcgaaaagatcagtccagaggatccccggacacaggcgttgattctctct
ccgacgcgcgaacttgccctccagacctcaggcgagatcaaaaggctttcccgccaccag
ggaaatctctctgtcgttccgatctatggaggtcaaccgatcggaagacagttcggagca
ctgcggcacggggcgcagatcattgtcgggacaccgggacgggtgatcgatcacctggag
cgcggtactctctctcttgacgctgtgcagaccgtcgtcctcgacgaggccgaccagatg
ctggacatgggtttcagggaggacatcgagcggatcctctcggagactccggaagaccgc
cagaccgtcctcttctcggcgacgatgccgggaccgatccgggatatctcgcgccgcttc
cagcgagacccggcgtttgtacgggtgcagcagaaagagatgaccgtcccgcaagtcgag
caactctcggtgacggtgcgggggagggagaagcccgaggtgctctccatgctcctccag
atctacaacccggaacttacgatcgtcttctgcaacaccaagcagggtgtggacgacctc
accactcagctccataccctcggggtcagggctgaggcgctccacggcgggatgaagcag
gtgcagcgcgatcgggtgatgggcaggttcaggaacgacgccatcgatgtgctcatcgcc
accgacgtcgccgccagggggatcgatgtcgaggacgtggagttggtcatcaactacgac
cttccccaggacatagaatattatatccaccggatcgggcggacggccagggccgggcgt
ggcggccgtgcgatcacctttgtcggaccgcgggacggctaccggctgagggcgatccag
cgccattccagggccaggatccacaacctcccggtcccgaccaagcgggatgttgaggag
agcagaatgcgcaatctggctgaaaaggtcaggcagacgatcgaggaaggagaccttgac
cggtacgccgggatcgtcgaccgggtgatcggcgaggatgatctctccgcccaggatgtt
gcggcggccctcctgaagatgatgctcagtcatgggacgacgcggccaaagtcaactgct
gcggaacctgaggataggggagaagtcgaggtcggaatgactcgtctccacctcaatgcc
ggcaaagaccgcaacatcagacccaaggatattgttggggctctggccggtgagaccggg
attccgggacggtccatcggggcgatccggatcgaagacaacaacactttcgtcgaggtg
cccgaggagtccgcaaagaccatcgtcgagcggatgaagggaaagagcatcgggagcgtc
cgtctcatcggcggaacgtgcctcaccatcgcgacgccgactaatcggtga
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