Flagellimonas marinaquae: LDL77_04070
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Entry
LDL77_04070 CDS
T07803
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
maqi
Flagellimonas marinaquae
Pathway
maqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL77_04070 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maqi03021
]
LDL77_04070 (rho)
03019 Messenger RNA biogenesis [BR:
maqi03019
]
LDL77_04070 (rho)
Transcription machinery [BR:
maqi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LDL77_04070 (rho)
Messenger RNA biogenesis [BR:
maqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LDL77_04070 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
DUF4778
NACHT
AAA_25
OB_RNB
AAA_22
Mor
AAA
DUF4100
DDHD
Presenilin
Motif
Other DBs
NCBI-ProteinID:
UBZ14898
LinkDB
All DBs
Position
873858..875471
Genome browser
AA seq
537 aa
AA seq
DB search
MFEISDLKAKKLPELQEIAKDLNVPKFKSLKKLDLVYQILDLQASNPKAVKETVAATTEE
KPESKPQRARTPRPKKTEEKSTTNESGDKAPPKREPRNKKDDSKGQSPQPKKDNKPQSNS
NSNNNSPQKNQNNNRRNNQNNKPHHDKKNSNFDKDLKNRYKEPEFEFDSIIESEGVLDIM
QDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLKSGDTILGNIRPPKEGEKYFPLIKVNK
INGLDPQVVRDRVAFEHLTPLFPKEKFKLAEKQSTISTRIMDLFSPIGKGQRGMIVSQPK
TGKTMLLKDIANAIAANHPEVYQIILLIDERPEEVTDMQRNVRGEVVASTFDKEATEHVR
VANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALHKPKRFF
GAARNIENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRRISNRRIFPAIDLI
SSSTRRDDLLLDENTIQRMWIMRKYLADMNPVEAMEFMEQRIKQTKNNEEFLLTMNE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagatttccgatctaaaagctaaaaagcttcctgagctgcaagaaattgcaaag
gatcttaatgttcccaaattcaaatcattgaaaaaattggacctggtctaccaaatattg
gacttacaggcgtccaatcccaaagcagttaaggaaactgtagcagcgactaccgaagaa
aaacctgaatccaaaccacaaagggccagaacacctcgtccaaaaaagaccgaggagaag
agcactactaatgaaagtggtgataaagcccctccaaaaagggagcccagaaacaaaaaa
gacgattcaaagggacaaagtccccaacccaaaaaggacaataagccacagagcaatagc
aatagcaacaataatagtcctcaaaagaatcagaacaacaatagaagaaacaaccagaac
aacaaaccacatcacgacaaaaagaacagcaactttgacaaggacctgaaaaacaggtac
aaagaaccagagttcgagttcgacagtattatcgagagtgaaggtgtcctggacattatg
caagatggttacggattccttagatcatccgattacaactatctttcttccccagatgat
atttatgtgtcgcaatcccagatacgtttattcggactaaaatccggtgatacgatctta
gggaacattagacctccaaaagagggtgaaaaatatttcccattgatcaaagtgaacaaa
atcaatggactggacccacaagtggttcgcgacagggtagcttttgagcaccttactcca
ttgtttccaaaggaaaagttcaaattggcggaaaagcaaagtacaatttcaacaaggatc
atggatttgttctctcctatcggaaaaggacaaaggggaatgatcgtttcccagcccaaa
acgggtaaaaccatgttgttgaaagatattgccaatgccattgcggccaaccaccctgag
gtgtaccaaatcatcctattaatcgatgaacgccctgaagaggttacggacatgcagcgc
aacgtacgcggagaagttgttgcttccacttttgacaaggaagccacagaacacgtaagg
gttgccaatattgtattggaaaaagcaaaaagattggtggaatgcggtcacgatgttgtg
atcctattggattccatcacccgtttggcccgtgcctacaacaccgtacaacccgcttct
ggcaaggtattgagtggtggtgtggatgccaacgcgctgcacaagccaaaacgtttcttt
ggtgcggcacgtaacattgaaaatggaggttctttatccattatcgcaacagccttaacg
gaaactggctccaaaatggacgaggttatctttgaggaattcaagggtaccggcaacatg
gagcttcaattggacagaagaatttccaacagaaggattttccctgccatcgaccttatt
tcttcctctacacgaagagacgatttgttgttggacgaaaacaccattcaacgtatgtgg
atcatgcgaaagtatcttgccgacatgaaccctgttgaagctatggagtttatggagcaa
cgcataaagcaaacgaagaacaacgaggagtttttactcaccatgaacgagtaa
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