Flagellimonas marinaquae: LDL77_04200
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Entry
LDL77_04200 CDS
T07803
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
maqi
Flagellimonas marinaquae
Brite
KEGG Orthology (KO) [BR:
maqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maqi03032
]
LDL77_04200 (gyrB)
03400 DNA repair and recombination proteins [BR:
maqi03400
]
LDL77_04200 (gyrB)
Enzymes [BR:
maqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LDL77_04200 (gyrB)
DNA replication proteins [BR:
maqi03032
]
Prokaryotic type
DNA Topoisomerases
LDL77_04200 (gyrB)
DNA repair and recombination proteins [BR:
maqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LDL77_04200 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UBZ14922
LinkDB
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Position
complement(902656..904596)
Genome browser
AA seq
646 aa
AA seq
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MSEEANKKQYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMAGYC
DKIEVTINEDNSITTEDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSTRLKATVYRDGKIWEQEYERGKSLYPVKSVGESKETGTIVTFVPDDTIF
TQTTEYNYDTLSNRMRELAYLNKGITIRLTDKRNKDEKGEFISETFHSEEGLKEFIKFLD
GNREPLIQNVVSMEGEKNGIPVEVAMVYNTGYSENLHSYVNNINTHEGGTHLSGFRRGLT
TTLKKYADNSGMLDKLKFEISGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVS
QAVSEMLTDYLEENPDDAKQIVEKVKLAAQARHAAAKAREMVQRKNPMSVGGLPGKLSDC
SEQDPTKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNI
YTALGVTIGTEEDSKALNLEKLRYHKVVIMCDADVDGSHIETLILTFFFRYMRELIEGGH
VYIATPPLYLVKKGAKKRYAWNDKERDAINAEMGGGAGIQRYKGLGEMNAEQLWDTTMNP
DFRKLRQVQIDNATESDRIFSMLMGDEVPPRREFIEKNAVYANIDV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagctaacaagaaacaatactccgcggatagtatccaggccctcgaggga
atggagcacgtacgtatgagaccttccatgtatattggagatgtaggggtcagaggattg
catcatttggtctatgaagttgtggataactccatcgatgaggcgatggccggttactgc
gataaaatcgaggtgaccatcaatgaagataactccataactacggaagataatggtagg
ggtatccctgttgaccttcataaaaaagaaggagtttctgcccttgaggtagtaatgacc
aaaattggtgcgggcggtaagtttgataaggattcctataaagtttccggaggactccac
ggtgtcggtgtttcctgtgttaacgcattgtcgactaggttgaaagcgacagtttatcgt
gacggtaaaatctgggagcaagaatacgaaagaggaaaaagcctttatccggttaaaagt
gtaggggagagcaaggaaacaggtaccatagtgacctttgttccagatgataccattttt
acccagacaacagaatataattatgataccttgtccaatagaatgcgcgagcttgcctat
ttgaacaaaggaatcaccattaggctcacggacaaaaggaacaaggacgaaaagggagaa
tttatttcagaaactttccattccgaagaaggtctgaaggaattcatcaaatttttggat
ggaaatagagaacctttgatccagaacgtagtttcgatggagggcgagaaaaacggtatc
cctgtggaagtggcgatggtctacaacacgggatattccgaaaaccttcattcctatgta
aacaatatcaatacccatgagggaggtacgcacttgtccggatttcgacggggacttacc
actaccttgaaaaagtatgccgataattccgggatgttggacaaattaaagttcgaaata
tccggagatgatttccgcgaaggattaacggccattgtttccgtaaaagttgcagaaccg
cagtttgaaggtcaaacaaagaccaaactggggaaccgtgaggttaccagtgcagtaagt
caggcagtttccgaaatgttgaccgattatttggaggaaaatccagatgatgcaaaacaa
attgtggaaaaagtgaagctggccgcacaggctaggcacgcagcggccaaggcccgtgaa
atggttcagcgaaaaaacccaatgagtgtaggtggattgccagggaaactatctgactgt
tccgagcaagaccctaccaaatgtgaagttttccttgtagagggagattccgcaggtgga
acggcaaaacaaggaagggacagaaatttccaagccatattgccattgcgcggtaagatt
ttgaacgtggaaaaagccatgcagcataaggtttttgaaaatgaggaaatcaagaatatt
tatactgcacttggggttaccattggtacggaagaagacagtaaggcgctgaaccttgaa
aaactgcgatatcataaagtagtgatcatgtgtgatgcggatgttgatggcagtcacatt
gaaacgttgattttgacattcttcttccgttatatgagggagcttattgaaggtgggcac
gtatatattgcaacccctccgttatatttggtgaaaaaaggtgccaaaaaacgctatgca
tggaacgataaggagcgtgatgcaatcaatgcagaaatgggcggaggagcaggtatccaa
cgttacaaaggtcttggtgaaatgaacgccgaacagctttgggataccacgatgaatcca
gattttagaaagttgcgtcaggttcagattgacaatgcaaccgaatccgaccgaatattc
tctatgttaatgggggacgaagtaccgcctagacgtgaatttatagagaaaaatgccgtc
tatgccaatatagatgtatag
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