Flagellimonas marinaquae: LDL77_04790
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Entry
LDL77_04790 CDS
T07803
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
maqi
Flagellimonas marinaquae
Pathway
maqi03030
DNA replication
maqi03430
Mismatch repair
maqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL77_04790
03430 Mismatch repair
LDL77_04790
03440 Homologous recombination
LDL77_04790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maqi03032
]
LDL77_04790
03400 DNA repair and recombination proteins [BR:
maqi03400
]
LDL77_04790
Enzymes [BR:
maqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL77_04790
DNA replication proteins [BR:
maqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDL77_04790
DNA repair and recombination proteins [BR:
maqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDL77_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
UBZ15034
LinkDB
All DBs
Position
1071791..1073161
Genome browser
AA seq
456 aa
AA seq
DB search
MYTIIDIETTGNGIKGNKITEISIFKYDGGQIVDEFTSLVNPQSPIPYFITGLTGIDDHM
VQNAPTFREIADTVLKITEGCIFVAHSVNFDYGVIKEEFRQIGVDFIRKKLCTVRLSRKL
IPGLRSYSLGKLCSAVNIPLVDRHRARGDAHATVLLFEKLLENPESKEVFKKFLNARSQE
ATLPPHLPKAVFDKIPQKPGIYYFMNQKGEIIYVGKAINLKKRVLGHFYDKSRKEIQMCN
ETANIDFKLAGSELVALLMESAEIKRLFPSYNRAQKRPGKQYAIFAYEDRNGITHLAYNT
SKGAPSPLKVFHNQTECRAYLEEVCKSFSLCPKYCHLQQTTSACSHHEINTCEGICRGDE
SPEDYNQKVDEAIAHMKMLSSEVKIIKEKGRAENESAVVLIADGIYKGFGFIDTEIQISS
IDDIEAFIIPQKHTLETESILTQYFLKHSKSQVLAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgtacaccatcatcgacatagagaccacgggaaacggaatcaaaggcaacaagattacc
gagatttccatttttaaatatgatggcggacagatagtggacgagtttacgtccttggtc
aaccctcaaagtcccattccctattttattacaggacttacgggaatcgatgatcacatg
gtgcaaaatgcacctacttttcgggaaattgccgatacggtcctaaaaattaccgaagga
tgcatttttgtggcccactccgttaattttgattatggggtcattaaagaagagttccga
cagatcggggtggatttcatccgtaaaaaactttgtaccgtacgtttatcgagaaagttg
atacctggactgcgttcctatagtttgggcaaactgtgttctgcggtgaacattcctttg
gtggacagacaccgcgcccgtggagatgcccatgccacggttcttctgttcgaaaagctt
ttggaaaatcctgagtcgaaagaggtctttaaaaagtttttgaatgcccgaagtcaagaa
gccacccttcctccacatttgcccaaagctgttttcgataagattccgcagaagcctggc
atctattattttatgaaccaaaaaggggaaattatttatgtgggcaaggccatcaaccta
aaaaaacgggtgttggggcatttttatgacaaaagccgcaaggagattcaaatgtgcaat
gagacagccaatatcgattttaaactggcaggcagcgaattggtagctctgttgatggaa
tccgcagaaataaaaaggttgttcccgtcctacaaccgtgcacaaaaaagaccaggtaag
caatacgccatttttgcctacgaggaccgaaatggcattacacatttggcctataacacg
agtaaaggggctccaagtccattgaaagtgttccataatcaaaccgaatgccgagcatat
ctggaagaagtatgtaaaagtttttcgctatgtcccaagtattgccatttgcagcaaaca
acctccgcctgctcccatcatgaaatcaatacctgcgaaggaatttgtaggggcgatgag
tcccccgaggattataaccaaaaagtggacgaggccatagcccacatgaaaatgttgtcg
tccgaagtcaaaatcatcaaggaaaaaggcagggccgaaaacgaaagtgccgtggtttta
atcgcggacggcatttacaaaggttttggttttatagatacagagattcaaatatcttcc
attgacgatattgaggcctttatcatcccgcagaaacatactttggaaacagaaagtatt
cttacccaatattttttgaagcacagcaagagtcaagtgcttgcttcgtaa
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