Flagellimonas marinaquae: LDL77_04890
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Entry
LDL77_04890 CDS
T07803
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
maqi
Flagellimonas marinaquae
Pathway
maqi02024
Quorum sensing
maqi03060
Protein export
maqi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
maqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LDL77_04890 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LDL77_04890 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LDL77_04890 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
maqi02044
]
LDL77_04890 (ffh)
Enzymes [BR:
maqi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LDL77_04890 (ffh)
Secretion system [BR:
maqi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LDL77_04890 (ffh)
Eukaryotic Sec-SRP protein
LDL77_04890 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
AAA_22
CLP1_P
Zeta_toxin
CbiA
cobW
AAA_17
KTI12
FtsK_SpoIIIE
APS_kinase
KAP_NTPase
AAA_24
AAA_33
AAA_16
AAA_18
ResIII
NPHP3_N
6PF2K
TsaE
NACHT
DO-GTPase1
Fe-ADH
ATP_bind_1
AAA_14
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
UBZ15054
LinkDB
All DBs
Position
complement(1088029..1089357)
Genome browser
AA seq
442 aa
AA seq
DB search
MFDNLSEKLDKAFHVLKGHGQITEINVAETLKEVRRALLDADVNFKIAKEFTNTVKEKAL
GQNVLTTLQPGQLMVKLVKDELTELMGGDAEEIDLSGNPSVILMSGLQGSGKTTFSGKLA
NYLKNKKTKKPLLVACDVYRPAAIDQLHVVGDQIGVEVYSDRDNNDPVAIAKAGIAHAKS
TGCNVVIIDTAGRLAVDEQMMDEISNIHKAIEPQETLFVVDSMTGQDAVNTAKAFNDVLN
FDGVILTKLDGDTRGGAAISIKSVVDKPIKFIGTGEKMEAIDVFHPSRMADRILGMGDVV
SLVERAQEQFDEEQARKIQKKIAKNKFGFDDFLSQIQQIKKMGNMKDLMGMIPGAGKALK
GLDIDDDAFKHIEAIIHSMTPEERSTPAMLNASRKKRIAAGSGTSIQEVNQLLKQFDQMS
KMMKMMQGGGGKKMMQMMQNMR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataatttaagcgaaaaattagataaagcattccacgtccttaaaggacatggt
caaattacggaaatcaatgtagcagagacccttaaggaagttcgaagagctttgttggat
gctgacgtaaactttaaaatagccaaggaatttaccaatacggtaaaggaaaaggcactg
ggtcaaaacgttttgaccacccttcaaccgggccagcttatggtgaagctggtaaaggat
gagcttaccgagcttatggggggcgatgctgaggaaatcgacctatcgggcaacccttct
gtaatactgatgtccggtcttcaaggttcgggtaaaaccaccttttccggtaaattggcc
aattatctcaaaaacaaaaaaacaaagaagccgcttttggtggcttgtgatgtgtatcgt
cctgcagcgatagatcagttgcatgtagtcggggaccaaatcggcgtagaggtttattcc
gatagggacaacaacgaccccgttgccattgccaaggcaggtattgcccatgcaaaaagt
acagggtgcaacgttgtaatcatcgatactgcaggtcgtttggccgtggacgagcagatg
atggatgaaatctccaacatccacaaagccattgagccgcaagaaactttgtttgtggtg
gactccatgacaggtcaagatgccgtgaatactgcaaaggcgttcaacgatgtacttaat
tttgatggtgtaatccttaccaagcttgatggtgatacccggggaggtgcggctatttcc
attaaatccgtagtggacaagcccatcaaatttattggtacaggcgagaaaatggaggcc
attgatgtgttccatccatcccgaatggccgatcgtatccttggaatgggagacgtggtg
tccttggtggagcgtgcccaagaacaattcgatgaagaacaggcgcgtaagattcaaaag
aaaattgccaagaataaattcgggtttgatgacttcttgagtcaaatacagcaaatcaag
aaaatggggaacatgaaagacctcatgggaatgattccaggtgcgggaaaggctctaaag
gggttggatattgacgatgatgccttcaagcacattgaggctattatccattctatgact
cccgaagaacgatctaccccagctatgttgaatgcaagccgcaaaaaaagaattgccgca
ggtagcggaacttctattcaagaagtgaaccagttgctaaagcaattcgaccaaatgagc
aagatgatgaagatgatgcaaggtggcggaggcaagaagatgatgcagatgatgcagaac
atgagataa
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