Flagellimonas marinaquae: LDL77_09065
Help
Entry
LDL77_09065 CDS
T07803
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
maqi
Flagellimonas marinaquae
Pathway
maqi00521
Streptomycin biosynthesis
maqi00523
Polyketide sugar unit biosynthesis
maqi00525
Acarbose and validamycin biosynthesis
maqi00541
Biosynthesis of various nucleotide sugars
maqi01100
Metabolic pathways
maqi01110
Biosynthesis of secondary metabolites
maqi01250
Biosynthesis of nucleotide sugars
Module
maqi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
maqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LDL77_09065 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDL77_09065 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LDL77_09065 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDL77_09065 (rfbB)
00525 Acarbose and validamycin biosynthesis
LDL77_09065 (rfbB)
Enzymes [BR:
maqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LDL77_09065 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UBZ15851
LinkDB
All DBs
Position
2016067..2017134
Genome browser
AA seq
355 aa
AA seq
DB search
MDKKDIPKNILITGGAGFIGSHVVRRFVAEYRDYQIFNLDALTYAGNLENLKDIEQAPNY
SFVKGDITDAYFVNDLFSQIDFDGIIHLAAESHVDRSITDPLSFVRTNVLGTVNLLNASL
QLVKDNADFLFYHISTDEVFGSLGREGFFNESTAYDPNSPYSASKASSDHFVRAYGETYD
LPYVISNCSNNYGPNQFPEKLIPLFINNIIKNMPLPVYGDGNYTRDWLYVKDHAEAIDLV
FHKGRKGETYNIGGFNEWRNIELTRLLCQLMDKKLGRKEGTSEKLITFVKDRPGHDLRYA
IDASKINKELGWKPSVTFEEGLEKTIDWYFENQEWLGHVTSGDYLEYYKKQYQTQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaagatattccaaaaaacattttaattacgggaggagccggctttatcggc
tctcatgtggtccggcggtttgtagctgaatacagggattatcaaatttttaatcttgat
gccctgacctatgcgggaaacttggaaaacctgaaagatatagagcaagccccaaactat
tcatttgttaaaggagatattactgatgcatattttgttaatgaccttttctcccaaatc
gattttgatgggataattcacttggccgcggaatcccatgtagaccggtctataaccgac
cccttatcttttgtgcgcaccaatgttttgggcacagtcaacttattgaacgcctcatta
cagttggtcaaggacaacgctgattttttattttatcatattagtactgatgaagttttt
ggaagcttgggacgggaaggtttcttcaacgaaagtacggcatacgaccccaactcgcct
tactcggcatccaaggcaagctctgaccattttgttagggcctatggtgagacctatgat
ttgccgtatgtcatttctaattgctccaataattacggccctaatcaatttcccgagaaa
ttgattcccctatttatcaacaatatcataaaaaatatgccattgcccgtttatggtgat
ggaaactatacacgggattggttatatgtaaaggaccatgccgaggccatcgatttggta
tttcataaaggaagaaaaggagaaacctacaacataggtggtttcaatgaatggcggaat
atagaattgacccgcttgctatgccaattaatggataaaaaacttggaagaaaggaggga
acttcagaaaaactgataacctttgtaaaagaccgcccaggacatgatttaagatacgcc
attgatgcatccaaaataaacaaagaattaggatggaaaccctcggtcacctttgaagaa
gggctcgaaaagaccatagattggtattttgaaaaccaagaatggctggggcatgttacc
tcgggtgactatttggaatattataaaaagcaatatcaaacacaatga
DBGET
integrated database retrieval system