Methylobacterium aquaticum: Maq22A_1p34410
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Entry
Maq22A_1p34410 CDS
T04311
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
maqu
Methylobacterium aquaticum
Pathway
maqu03420
Nucleotide excision repair
maqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Maq22A_1p34410 (uvrD)
03430 Mismatch repair
Maq22A_1p34410 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maqu03400
]
Maq22A_1p34410 (uvrD)
Enzymes [BR:
maqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Maq22A_1p34410 (uvrD)
DNA repair and recombination proteins [BR:
maqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Maq22A_1p34410 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Maq22A_1p34410 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_12
DUF3553
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAQ49153
UniProt:
A0A0C6FL42
LinkDB
All DBs
Position
pMaq22A_1p:complement(913852..916206)
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AA seq
784 aa
AA seq
DB search
MTRDIAGTGSTSISARARAAVVPQGVSYLDGLNPEQRRAVEVTDGPILVLAGAGTGKTRV
LTTRIAHLIATGRARPFDILSVTFTNKAAREMKERIGALIGAAGEGMPWLGTFHAIGTKI
LRRHAELVGLRSDFTILGTDDQLRLLKQVIAAADLDEKRWPARSLAGTIDGWKNRGLGPE
QVPAGEASAFGFGKGGALYAAYQERLKSLNAVDFGDLLLLCLRLWRENPDILTNYQQRFR
YILVDEYQDTNVAQYLWLRLLAQGHRNVACVGDDDQSIYGWRGAEVDNILRFEHDFPGAL
VVRLENNYRSTGHILAAASVLIAHNEGRLGKTLRTDSPEGEKVTVTGAWDSEEEARLVCE
EIESLQAKGHKLSEIAVLVRISAQMREIEDRFVQLGLPYRVVGGPRFYERAEIRDALAYL
RIVANGSDDLAFERIFNTPKRGLGDATLQALHGLARRANVPLLQAARMMSETEELKPKPR
STVRALCQSFSRWAKLLEDQPHTEVAQTILEESGYTEMWQKERTADAAGRLENLKELVRS
MEEFPDLAGFLEHVSLVMDVNEAEGGDRVSLMTLHAAKGLEFDTVFLPGWEHGLMPNQRA
LDESGRAGLEEERRLAHVGLTRARKRAKISFAVNRRIHGLWSSTVPSRFIDELPEASVEV
RDAPASFSQGPSRFDRQAPAFGSSYSTPGWQRAQAQTAGQDRYGQGGFGGGGRSTSPGRR
GLQQIEGTLVAKSTGTPSAFEAGARIFHTKFGPGSVAAVDGNKLTVDFDKAGRKMVLDSF
VQPA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgatatcgccgggaccggctccacctcgatctccgcccgcgcccgcgccgcg
gtggtgccccagggcgtctcctacctcgacgggctgaacccggagcagcgccgcgccgtc
gaggtgacggacgggccgatcctggtgctggccggcgccggcaccggcaagacccgggtg
ctgaccacgcggatcgcccacctgatcgccaccggccgcgcccggcccttcgacatcctg
tcggtgaccttcaccaacaaggccgcccgggagatgaaggagcgcatcggcgcgctgatc
ggcgcggccggcgaggggatgccgtggctcggcaccttccacgccatcggtaccaagatc
ctgcgccgccacgccgaactcgtcggcctgcgctccgacttcacgattctcggcaccgac
gaccagttgcggctcctcaagcaggtgatcgcggcggccgacctcgacgagaagcgctgg
ccggcccgcagcctcgccggcacgatcgacggctggaagaaccgcggcctcgggcccgag
caggtgccggcgggcgaggcctcggccttcggcttcggcaagggcggggcgctctacgcc
gcctaccaggagcggctgaagtcgctcaacgcggtcgatttcggcgacctgctgctgctg
tgcctgaggctgtggcgggagaacccggacatcctcaccaactaccagcagcgctttcgc
tacatcctggtcgacgagtaccaggacaccaacgtcgcccagtatctctggctgcggctc
ctggcgcaggggcaccgcaacgtcgcctgcgtcggcgacgacgaccagtcgatctacggc
tggcgcggcgccgaggtcgacaacatcctgcgcttcgagcacgattttccgggtgccctg
gtggtgcggctggagaacaactaccgctcgaccggccacatcctggcggcggcgtccgtc
ttgatcgcccacaacgaggggcggctgggcaagaccctgcgcaccgacagcccggagggc
gagaaggtcacggtcaccggcgcctgggattcggaagaggaagcgcgcctcgtctgcgag
gagatcgagagtttgcaggccaagggccacaagctgtcggagatcgccgtgctggtgcgg
atctcggcccagatgcgcgagatcgaggaccgcttcgtccagctcgggctgccctaccgc
gtcgtcggcggcccgcgcttctacgagcgggccgagatccgcgacgcgctcgcctatctg
cggatcgtcgccaacggctccgacgacctcgccttcgagcggatcttcaacacgcccaag
cgcggcctgggcgacgcgaccctccaggccctgcacggcctggcgcgccgcgccaacgtc
ccgctgctccaggcggcccggatgatgagcgagaccgaggagctgaagcccaagccccgc
tcgaccgtgcgcgccctgtgccagagcttctcccgctgggccaagctcctggaggaccag
ccgcacaccgaggtggcccagacgatcctggaggaatccggctacaccgagatgtggcag
aaggagcgcaccgccgacgccgccgggcggctcgagaacctgaaggagctggtgcgctcg
atggaggagttcccggacctcgccggcttcctcgagcacgtctcgctggtgatggacgtc
aacgaggccgagggcggcgaccgggtgagcctgatgacgctgcacgcggcgaaggggctc
gagttcgacaccgtcttcctgcccggctgggagcacgggctgatgcccaaccagcgcgcc
ctcgacgagagcggacgcgccggcctggaggaagagcgccgcctcgcccatgtcggcctc
acccgggcgcgcaagcgggccaagatctcgttcgcggtcaaccgccgcatccacggcctg
tggtcctcgaccgtgccgagccgcttcatcgacgaattgcccgaggcgagcgtcgaggtg
cgcgacgcgccggcaagcttctcgcagggaccgtcgcgcttcgaccgccaggcgccggcc
ttcggctcgtcctactccaccccgggctggcagcgggcgcaggcccagaccgccggccag
gaccgctacggccagggcgggttcggcgggggagggcgcagcacctcgcccggccggcgc
gggctgcagcagatcgaggggacgctggtggcgaaatccaccggcacgccgtccgccttc
gaggccggggcgcggatcttccacaccaaattcgggccgggctcggtggcggcggtcgac
ggcaacaagctcaccgttgacttcgacaaggccggccgaaagatggtgctcgacagcttc
gtccagccggcctga
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