Methylobacterium aquaticum: Maq22A_c18760
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Entry
Maq22A_c18760 CDS
T04311
Symbol
recD
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
maqu
Methylobacterium aquaticum
Pathway
maqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Maq22A_c18760 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maqu03400
]
Maq22A_c18760 (recD)
Enzymes [BR:
maqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Maq22A_c18760 (recD)
DNA repair and recombination proteins [BR:
maqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Maq22A_c18760 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Helicase_RecD
AAA_11
Viral_helicase1
HHH_2
AAA_22
PIF1
nSTAND3
DUF3701
UvrD-helicase
AAA_28
DEAD
AAA_16
TrwB_AAD_bind
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAQ46835
UniProt:
A0A0C6FUP2
LinkDB
All DBs
Position
3625789..3628014
Genome browser
AA seq
741 aa
AA seq
DB search
MARPAPPTSRSPDALAGSIERVTFHNAESGFCVLKVKARGRRDLVAVTGHAPAVAAGEWV
TATGAWVSDREHGLQFRADTLAATPPTGVEGIGRYLASGQMRGIGPEMAKRIVAAFGAET
FAVIEEAPQRLTEVAGIGPTRAARITAAFAEHKAVREIMVFLHAHGVGTARAVRIYRTYG
RESVAVMTEDPYRLARDVRGIGFRTADAIAGRLGLAPTAPERLRAGLAYALQAAMDDGHC
ALPVPDLVARAAALLAVEAGLLRTALVEEIGGESVVMDTIADVPHLFLRGLHAAESAIAE
RLIALDDAPLPWDEIDAGAALATVEAETGRPLSPSQRAAAATLLNAKVAVMTGGPGVGKT
STLDVLLRMLDAAGAGVLLAAPTGRAAKRMTEQTGREAKTIHRLLEIDPQHGGFQRNEHS
PLACDLLVLDEASMIDVPLMNALTRALPRHAALWLVGDVDQLPSVGPGRVLADVIDSGRV
AVARLTEVFRQAAESRIVTGAHRINAGQMPEGADTPDGDFFVVKIDDPEAGAETLVEIVT
RRIPRRFGLDPVKDVQVLCPMTRGALGSRHLNQALQRVLNPNPTVSVERFGWVFAPGDRV
MVGQNDYDREVFNGDLGVVLRVDPEEEILVAGFEERDAASRAVVLREVAWPFGELDALSP
AYAVTIHKSQGSEYPAVVIPVAMQHYTMLARNLLYTGVTRGKRLVVLVAQPKAVATAVRG
GVKPRFTKLAEWLRKPARKRK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcccgctcccccgacctcccgctcccccgacgccctcgccgggtcgatcgag
cgcgtcaccttccacaatgccgagagcgggttctgcgtcctgaaggtcaaggcgcggggc
cggcgcgacctcgtggcggtgaccgggcacgcgcccgcggtggcggcgggcgagtgggtg
accgcgaccggcgcctgggtcagcgaccgcgagcacggcctgcagttccgcgccgacacg
ctcgcggcgaccccgcccaccggcgtcgagggcatcggccgctacctcgcctcgggccag
atgcgcggcatcggcccggagatggccaagcgcatcgtcgcggccttcggggccgagacc
ttcgcggtgatcgaggaagcaccccagcgcctgaccgaggtcgccggcatcggcccgacg
cgcgccgcgcggatcacggccgccttcgccgagcacaaggcggtgcgggagatcatggtg
tttctccacgcccacggcgtcggcaccgcccgggcggtcaggatctacaggacctacggc
cgcgagtcggtcgcggtgatgaccgaggacccgtaccggctcgcccgcgacgtgcgcggc
atcggctttcgcaccgccgacgccatcgcgggcaggctcggcctggcgccgacggcgccc
gagcgcctgcgcgccggcctcgcctacgcgctccaggcggcgatggacgacggccactgc
gccctgccggtgcccgacctcgtcgcccgcgccgccgcgttgctggcggtcgaggcgggc
ctgctccgcaccgccctcgtcgaggagatcggcggcgagtcggtggtgatggatacgatt
gccgacgtgccccacctgttcctgcgcggcctgcacgcggccgaatccgcgatcgccgag
cggctgatcgccctcgacgacgcgcccctgccctgggacgagatcgatgcgggggccgca
ctcgcgacggtggaggccgagaccggccggccgctctcgccctcgcaacgggcggcggcc
gcgacgctgctcaatgccaaggtcgcggtgatgaccggcggccccggcgtcggcaagacc
agcacgctcgacgtgctcctgcgcatgctcgacgcggcgggggccggggtgctgctcgcc
gcccccaccggccgggcggccaagcgcatgaccgagcagaccgggcgcgaggcgaagacc
atccaccgcctgctcgagatcgacccgcagcacggcggcttccagaggaacgagcattcc
cccctcgcctgcgacctcctggtgctggacgaggcctcgatgatcgacgttcccctgatg
aacgcgctgacccgggccctgccgcgccacgccgcgctctggctcgtcggcgacgtcgac
cagctgccctcggtcgggccgggccgggtgctggccgacgtgatcgattcgggccgcgtc
gcggtggcgcgcctgaccgaggtcttccgccaggccgccgagagccggatcgtcacgggc
gcccaccggatcaatgccgggcagatgccggagggcgccgacacccccgacggcgacttc
ttcgtggtgaagatcgacgatcccgaggccggggccgagacgctcgtcgagatcgtcacc
cgccgcatcccgcgccgcttcggcctcgatccggtcaaggacgtgcaggtgctctgcccg
atgacccgcggggcgctcggcagccgccacctcaaccaggcgctccagcgggtgctgaac
ccgaacccgaccgtctcggtcgagcgcttcggctgggtcttcgcccccggcgaccgggtg
atggtgggccagaacgactacgaccgcgaggtcttcaacggcgatctcggggtggtgctg
cgggtcgatcccgaagaggaaatcctggtcgcgggcttcgaggagcgcgatgcggcgtcg
cgtgccgtggtcctgcgcgaggtggcctggccgttcggcgagctcgacgccctgagcccc
gcctacgccgtcacgatccacaagtcgcagggctcggaataccccgccgtggtgatcccg
gtggcgatgcagcactacacgatgctcgcccgcaacctgctctatacgggcgtgacccgg
ggcaagcggctagtggtgctggtggcgcaaccgaaggccgtggcgaccgccgtgcggggt
ggggtgaagccgcggttcaccaagctggcggagtggctgcgcaagccggcgagaaagcga
aaataa
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