Methylobacterium aquaticum: Maq22A_c24325
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Entry
Maq22A_c24325 CDS
T04311
Symbol
mfd
Name
(GenBank) DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
maqu
Methylobacterium aquaticum
Pathway
maqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
maqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Maq22A_c24325 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maqu03400
]
Maq22A_c24325 (mfd)
Enzymes [BR:
maqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Maq22A_c24325 (mfd)
DNA repair and recombination proteins [BR:
maqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Maq22A_c24325 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
TRCF
UvrB_inter
CarD_TRCF_RID
ResIII
UB2H
AAA_30
Cas3-like_C_2
RecG_dom3_C
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAQ47793
UniProt:
A0A0C6FGZ1
LinkDB
All DBs
Position
4691791..4695084
Genome browser
AA seq
1097 aa
AA seq
DB search
MAKRKVGRRAQAGTEESVAPLVPPGALAVALLGLRDRGRPLVHVARDTRRLEEIAALLRA
LAPGIGVAVYPEWDCLPFDRASPSRGTMGARAGVLRWLTDTDNLPDILLTTAPALIQRVP
PPGTWAGARVELTAGDPLDPGRLTAELQRLGYILDDRVDEPGEVAVRGRTVDVFPAAAPR
PCRIEHAGGKVTAIRSYDPVSQRSLDEVGTLVVDPATEIVLAPDAPVRLKPFSGQEHQLP
TLYGRLATVLDYVPEARLVVEAGAEARADAFFEQIAEGQGGATSARGKAAPLYLSPAEWR
ETRAAREVAVATKEEADAVAVPVFLRERRPGPAFSAYLRERLKAGERVVLAGDAAALKRL
SRQAARAAERGVRPVCDWSQAMAAKPGEIVALAAPLDAGFRVPEMAATVIAAPDVHGGAS
AKPLAGQPVILPMGEVDLRVGDVAVDRDHGLCVFEGLERIATGDGGATEALRLRFAHDAI
LMVPVAQADRIWRYGSEEEAVALDTLEGGTWARRRLTTEAGLARAARAMLEAAGIRAKAK
APALTPPEREMERFGAGFGFPLTPDQAKAVDGALADLASERPMDRLVCGDVGFGKTEVAL
RAAAAALLAGKQVAVVAPTTVLVRQHLRTFARRFARFGIEVAQLSRLVPPAEAKKVRQGL
ADGSIRLVIGTQALAGRGVSFADLGLVVIDEEQRFGAALKERLRGMAGDAHVLTLTATPI
PRTLQSALVGLKSLSVIATPPAVRQPIRTILTPLHDDTVRAALMREKGRGGQSFVVCPRI
EEIGPMAERLKALVPELATVVAHGEMKPAELDEIMVRFADGEGDVLLATSIIESGLDVPR
ANTMLVHDAERFGLAQLHQLRGRVGRGQRRGVTYLLTRPDRELPAAAEKRLRTLEALDRL
GAGFAISARDLDLRGAGDLVGENQAGHVKLIGLGLYQHLLHLALRAAKGEPAEDWAPEIH
LGLAGDVPEDYVPEPEVRLGLYTRLLRLGVPEEVEALRGEVEDRFGPPPAGVRALFALAH
LRVACLRLGIARLTGGPQGLAVDFRPGCAPAAISLTEAMTAREGRLILRRPCDDPDRRAE
QAAEFLHQIQEARDHQG
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgcaaggtgggacggcgcgcacaggcgggaaccgaggagagcgtggcgccg
ctggtgccgcccggcgccctcgcggtggcgctgctgggcctgcgcgaccggggccgtccg
ctcgtccacgtcgcccgcgacacgaggcggctggaggagatcgccgccctgctgcgggcg
ctggcgccggggatcggcgtcgcggtctatccggaatgggactgcctgcccttcgaccgc
gcctcgccgtcgcgcggcacgatgggggcgcgggccggggttctgcgctggctcaccgac
acggacaacctgcccgacatcctgctcaccaccgccccggcgctgatccagcgggtgccg
ccgcccggcacctgggccggggcccgggtcgagctgacggccggcgatcccctcgatccc
gggcggctgaccgcggagttgcagcgcctcggctacatcctcgacgaccgggtcgacgag
cccggcgaggtcgcggtgcggggccgcaccgtcgacgtgtttccggccgccgcgccccgg
ccctgccgcatcgagcatgccggcggcaaggtgacggcgatccgcagctacgatccggtg
tcgcagcgctccctcgacgaggtcggaaccctggtggtcgatccggcgaccgagatcgtg
ctggcccccgacgcgccggtgcgcctcaagccgttcagcggccaggagcaccagttgccg
accctctacggccggctcgccaccgtgctcgactacgtgcccgaggcccgcctcgtggtc
gaggccggggcggaggctcgcgccgacgccttcttcgagcagatcgccgaggggcagggc
ggcgcgacgagcgcccgcggcaaggcagcgccgctctatctgagccccgcggaatggcgg
gagacccgggccgcccgcgaggtcgcggtggcgaccaaggaggaggccgacgcggtcgcg
gtgccggtcttcctgcgcgagcgccggccgggcccggccttctcggcctatctgcgcgag
cgcctgaaggccggcgagcgggtggtgctggccggcgacgcggcggcgctcaagcggctg
tcgcgccaggcggcccgggcggcggagcgcggcgttcgaccggtctgcgactggtcgcag
gcgatggccgccaagcccggcgagatcgtggcgctcgccgcccccctcgatgccgggttc
cgggtgccggagatggccgcgacggtgatcgcggcccccgacgttcatggcggggcctcg
gccaagccgctcgccgggcagccggtgatcctgccgatgggcgaggtcgatctgcgggtc
ggagacgtcgcggtggaccgcgaccacggcctgtgcgtgttcgaggggctggagcgcatc
gccaccggcgacggcggcgccaccgaggccctgcgcctgcgcttcgcccacgacgcgatc
ctgatggtgccggtggcccaggccgaccggatctggcgctacggctcggaggaggaggcg
gtcgccctcgacacgctcgagggcggcacatgggcgaggcgccggctgaccacggaggcc
ggcctcgcccgggccgcccgggccatgctggaggcggccggcatccgcgcgaaggcgaag
gccccggccctgacgccgcccgagcgcgagatggagcgcttcggcgccggcttcggcttc
ccgctcaccccggaccaggcgaaggccgtcgacggggcgctcgccgacctcgcctccgag
cggccgatggaccggctggtctgcggcgatgtcggcttcggcaagaccgaggtggcgctg
cgcgccgccgccgccgcgctgctggccggcaagcaggtggcggtggtcgcgcccaccacc
gtgctggtgcgccagcacctgcgcaccttcgcgcggcgcttcgcccggttcgggatcgag
gtggcgcagctctcgcgcctcgttccgccggccgaggcgaagaaggtccgccagggtctc
gccgacgggtcgatccgcctcgtgatcggcacccaggcgctcgccgggcgcggcgtgtcc
ttcgccgatctcggcctcgtggtgatcgacgaggagcagcgcttcggcgccgccctcaag
gagcgcctgcgcggcatggcgggcgacgcccacgtgctgacgctgaccgcgacgccgatc
ccccgcaccctgcaatcggcgctggtcggcctgaagtcgctcagcgtgatcgcgacgccc
ccggcggtgcgccagccgatccgcacgatcctgaccccgctccacgacgacaccgtccgg
gcggcgctgatgcgcgagaagggacggggcggacagagcttcgtcgtctgcccgcggatc
gaggagatcggcccgatggccgagcgacttaaggcgctggtgccggaactcgccaccgtc
gtggcccacggcgagatgaagccggccgagctcgacgagatcatggtccgcttcgccgac
ggggagggcgacgtgctcctcgccacctcgatcatcgagagcggcctcgacgtgccgcgg
gccaacaccatgctggtccacgacgccgagcgcttcggcctcgcccagctgcaccagctg
cgcggccgggtcgggcgcggccagcgccggggcgtcacctacctgctgacccggcccgac
cgggagctgcccgcggccgccgagaagcgcctgcggacgctcgaggccctcgaccggctc
ggcgcgggcttcgccatcagcgcccgcgacctcgacctgcgcggcgccggcgacctcgtc
ggcgagaaccaggccggccacgtcaagctgatcgggctcggcctctaccagcacctgctg
cacctggcgctgcgcgccgccaagggcgagccggcggaggactgggcgcccgagatccat
ctcggcctcgcgggcgacgtgcccgaggattacgtgcccgagccggaggtgcgcctcggc
ctctacacccggctcctgcgcctcggtgtgcccgaggaggtcgaggccctgcgcggcgag
gtcgaggatcggttcgggccgccgcccgcgggcgtgcgggcgctgttcgcgctggcgcac
ctgcgcgtcgcctgcctgcggctcggcatcgcccggctcaccggcgggccgcaggggctg
gcggtcgatttccggcccggctgcgcgccggcggcgatatcgcttaccgaggcgatgacc
gcccgcgagggccggctgatcctgcgccgcccctgcgacgatcccgaccggcgcgccgag
caggcggcggaattcctgcaccagatccaggaggcccgcgaccaccagggctga
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