Methylobacterium aquaticum: Maq22A_c25085
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Entry
Maq22A_c25085 CDS
T04311
Symbol
nei
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
maqu
Methylobacterium aquaticum
Pathway
maqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Maq22A_c25085 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maqu03400
]
Maq22A_c25085 (nei)
Enzymes [BR:
maqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Maq22A_c25085 (nei)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Maq22A_c25085 (nei)
DNA repair and recombination proteins [BR:
maqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Maq22A_c25085 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAQ47925
UniProt:
A0A0C6FXA2
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All DBs
Position
4849801..4850691
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AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLAPAMVGARFTDVVLNRPNLRFPFPPRFAARVKGQEVTALSRRAKYL
VAELSSGEALIMHLGMSGRFDVHLPDGRSVSPGDFYLDGAQGQSKHDHVDFRLSNGARVV
YNDARRFGFMDLVPSAELSTCRHFAGMGIEPLGNELSGETIARLFWGKRTPVKAALLDQR
LIAGLGNIYVCEALHRAKLHPEAPAGSLADAAGRPTAKAKRLAVVIRDVLTEAVAAGGST
LRDYVHTDGSQGAFQHAFRVYDREGLACTAKGCRGVVRRLVQSGRSTFFCETCQPG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgagaccgtgcgccgcggtttggcgcccgcgatggtcggc
gcccgcttcaccgacgtggtgctgaaccggcccaacctgcgctttcccttcccgccgcgt
ttcgccgcccgggtgaaggggcaggaggtcacggccctgtcgcggcgcgccaagtacctc
gtcgccgaactctcgtccggcgaggcgctgatcatgcatctcggcatgagcggacgcttc
gacgtgcacctgcccgacgggcgctccgtctcgcccggcgacttctatctggacggcgcg
caaggccagtcgaagcacgaccacgtcgatttccggctctcgaacggggcgcgggtcgtc
tacaacgacgcccgccgcttcggcttcatggacctggtgccgtccgcggagctgtccacc
tgccgccacttcgccggcatgggcatcgagccgctcggcaacgagctctcgggcgagacg
atcgcgcggctcttttggggcaagcgcacgccggtcaaggccgcgctcctcgaccagcgg
ctgatcgcgggcttaggcaacatctacgtctgcgaggccttgcaccgggccaagctccac
ccggaggcgcccgccgggtcgctcgcggatgccgccggccgtccgaccgcgaaggccaag
cgcctcgcggtcgtgatccgcgacgtgctgaccgaggcggtggcggcgggcggctccacc
ttgcgcgactacgtccacaccgacggcagccagggcgccttccagcacgccttccgggtc
tacgaccgggaggggctggcctgcacggcgaaggggtgccgcggggtggtgcggcggctg
gtgcagtcgggacgctcgacgttcttctgcgagacgtgccagccggggtaa
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