Methylobacterium aquaticum: Maq22A_c27065
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Entry
Maq22A_c27065 CDS
T04311
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
maqu
Methylobacterium aquaticum
Pathway
maqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Maq22A_c27065 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maqu03021
]
Maq22A_c27065 (rpoC)
03400 DNA repair and recombination proteins [BR:
maqu03400
]
Maq22A_c27065 (rpoC)
Enzymes [BR:
maqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Maq22A_c27065 (rpoC)
Transcription machinery [BR:
maqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Maq22A_c27065 (rpoC)
DNA repair and recombination proteins [BR:
maqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Maq22A_c27065 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BAQ48267
UniProt:
A0A0C6FMC4
LinkDB
All DBs
Position
complement(5224344..5228549)
Genome browser
AA seq
1401 aa
AA seq
DB search
MNQEVMNLFNQQAQPQSFDQIKISISSPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRDRMGHIELAAPVAHIWFLKS
LPSRIGLLLDMALKDLERILYFESYVTIEPGLTPLKERQLLSEEEYLRAQEEYGEDSFTA
MIGAEAIRRILQELDLDKIAADLREEIATTTSELKPKKLLKRLKIIEAFQMSGNRPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDIVLGLYYLSIVADGSPGEHKPNDPKNPMRGVFG
DFGELEHALAARTVTLHTKIKWRWRGLDSEGNEVSRIYDTTPGRVILSSVLPRHKRVPFD
VVNKLMTKKEISAMIDTVYRHCGQKESVIFCDRIMGLGFIHAFRAGISFGKDDMVVPDNK
WSIVDETRTLVKDYEQQYQDGLITQGEKYNKVVDAWAKCSDRLAGEMMNRISSVQKDEHG
ADKQVNSIYMMSHSGARGSPAQMKQLAAMRGLMAKPSGEIIETPIISNFKEGLDVLEYFN
STHGARKGLADTALKTANSGYLTRRLVDVAQDAVIREVDCGTENGIRMRAIIDAGQVVAS
LATRILGRATAEDLVANDGSIIVAKGETIEEKHLEPITKAGIQEVKIRSVLVCATRNGVC
ATCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADSSFIESSFEG
TVRIRNRGLARNSDGDLVAIGRNVAVVIVGPDGTERAVHRLQYGARVRVDEGDAIKRGQR
IAEWDPYTRPILTEIDGIVAYEDLIDGQSITETTDESTGIAKRVVIDWRGSARTADLRPA
IAVHDQNGRVQKLPRGSDARSILPVEAIIGVDPGTRVKAGDILARVSTDSAKTRDITGGL
PRVAELFEARRPKDAAIIAEKSGTISFGRDYKNKRRLSLTPHDGSEPVEYLIPKGKHIHL
QDGDVVELGDFIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVSINDKHIEVIVR
QMLQKVEITDGGDSEILTGDQIDRMELAEFNEKLLAEGKKPIQGVPVLLGITKASLQTRS
FISAASFQETTRVLTEAAVNGKVDNLEGLKENVIVGSLIPAGTGAMIADIKSIARRRDGL
IMAQKSAESGAAVAERLPAAE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaaccagcaggctcagcctcagagcttcgaccag
atcaagatctcgatctcgtcgcctgagaagatcctgtcctggtcctacggcgagatcaag
aagcccgagaccatcaactaccgcacgttcaagcccgagcgcgacggcttgttctgtgcc
cggatcttcgggccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcgtgatctgcgagaagtgcggcgtcgaggtcaccctcgcgcgcgtgcgccgc
gaccgcatgggccatatcgagctcgccgcgcccgtcgcccacatctggttcctgaagtcg
ctgccgagccgcatcggcctgcttctcgacatggcgctcaaggacctcgagcgcatcctg
tacttcgagtcctacgtcaccatcgagccgggcctcacccccctgaaggagcgtcagctc
ctctcggaggaggagtacctgcgcgcgcaggaggagtacggcgaggacagcttcaccgcc
atgatcggcgcggaggcgatccggcgcatcctgcaggagctcgacctcgacaagatcgcg
gccgacctgcgcgaggagatcgccaccaccacctccgagctgaagcccaagaagctcctg
aagcgcctcaagatcatcgaggcgttccagatgtcgggcaaccggcccgagtggatgatc
ctgaccgtcgtcccggtgatcccgccggacctgcgcccgctcgtgccgctggacggcggc
cgcttcgcgacctcggacctcaacgacctctaccgccgcgtcatcaaccggaacaaccgc
ctcaagcggctgatcgagctgcgcgcgccggacatcatcatccgcaacgagaagcggatg
ctgcaggaggcggtcgacgcgctgttcgacaacggccgtcgcggtcgcgtcatcaccggc
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgtgtggactattccggccgttcggtcatcgtggtgggc
ccggagctgaagctgcaccagtgcgggctgcccaagaagatggcgctcgagctgttcaag
ccgttcatctacgcgcgcctcgacgccaagggcttctcggcgacggtgaagcaagcgaag
aagctcgtcgagaaggagaagccggaggtctgggacatcctggacgaggtgatccgcgag
catcccgtgatgctgaaccgggcgccgacgctgcaccggctcggcatccaggccttcgag
ccgaagctgatcgagggcaaggcgatccagctgcacccgctggtctgcgctgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgtcgctcgaggcgcagctg
gaagcgcgcgtcctcatgatgtcgacgaacaacatcctgcacccggccaacggcgcgccg
atcatcgtgccgtcgcaggacatcgtgctcggcctgtactacctgtcgatcgtcgccgac
ggctcgccgggtgagcacaagccgaacgatcccaagaacccgatgcggggcgtgttcggt
gatttcggcgagctcgagcatgcgctcgcggcccgcaccgtgaccctgcacaccaagatc
aagtggcgctggaggggcctggattccgagggcaacgaggtctcgcggatctacgacacc
accccgggccgcgtaatcctgtcgagcgtgctgccgcgccacaagcgcgttcctttcgac
gtcgtcaacaagctgatgacgaagaaggagatctcggcgatgatcgacaccgtctaccgc
cattgcggtcagaaggagtcggtgatcttctgcgatcgcatcatgggtctcggcttcatc
cacgccttccgcgccggcatctcgttcggcaaggacgacatggtggtgccggacaacaag
tggtcgatcgtcgacgagacccgcacgctcgtgaaggactacgagcagcagtaccaggac
ggcctgatcacccagggcgagaagtacaacaaggtcgtggacgcctgggccaagtgctcc
gaccgtctcgccggcgagatgatgaaccgcatctcgtccgtgcagaaggacgagcatggc
gccgacaagcaggtcaactcgatctacatgatgagccactcgggcgcccgtggctcgccg
gcgcagatgaagcagctcgcggcgatgcgcgggctgatggccaagccgtcgggcgagatc
atcgagaccccgatcatctcgaacttcaaggaaggcctcgacgttctcgagtacttcaac
tcgacccacggcgcccgcaagggcctcgccgataccgcgctcaagaccgccaactccggc
tacctgacccgccgcctcgtcgacgtggcgcaggacgcggtgatccgcgaggtggattgc
ggcaccgagaacggcatccggatgcgtgcgatcatcgatgccggccaggtcgtggcctcg
ctggcgacccgcatcctcggccgcgcgacggccgaggacctggtcgccaacgacggctcg
atcatcgtcgccaagggtgagacgatcgaggagaagcacctcgagccgatcaccaaggcc
ggcatccaggaggtgaagatccgctcggtcctggtctgcgcgacccggaacggcgtctgc
gctacctgctacgggcgcgatctcgcccgcggcacgcccgtcaacatgggcgaggccgtc
ggcgtcatcgcggcgcagtcgatcggcgagccgggcacccagctcacgatgcgcaccttc
cacatcggcggcgcggcccagatcgccgactcgtccttcatcgagtcgagcttcgagggc
acggtccggatccgcaaccggggtctcgcccgcaattcggacggcgatctcgtcgcgatc
ggccgcaacgtcgcggtggtgatcgtcgggccggacggcaccgagcgggcggtccaccgc
ctgcaatacggcgcccgcgtccgggtcgacgagggcgacgcgatcaagcgcggccagcgc
atcgccgagtgggatccctacacccggccgatcctgaccgagatcgacggcatcgtggcc
tacgaggacctgatcgacggtcagtcgatcaccgagacgaccgacgagtcgaccggcatc
gccaagcgcgtcgtcatcgactggcgcggctcggcgcggacggcggacctgcgtccggcg
atcgcggtccacgaccagaacggccgggtgcagaagctgccgcgcggctcggatgcccgc
tcgatcctgccggtggaggcgatcatcggcgtcgacccgggcacccgggtcaaggccggc
gacatcctcgcccgcgtctcgaccgacagcgccaagacccgcgacatcaccggcggtctg
ccgcgggtggcggagctgttcgaggcccgccggccgaaggacgcggcgatcatcgccgag
aagtccggcacgatctcgttcgggcgcgattacaagaacaagcgccgcctgagcctgacc
ccgcacgacggctccgagccggtggagtacctgatcccgaagggcaagcacatccacctg
caggacggcgacgtggtcgagctcggcgacttcatcgtcgacggcaacccggcgccgcac
gacatcctggcgatcaagggcgtggaggagctcgccgcctacctcgtcaacgagatccag
gaggtctaccggctccagggcgtgtcgatcaacgacaagcacatcgaggtcatcgtccgg
cagatgctgcagaaggtggagatcaccgacggcggcgattccgagatcctgacgggcgac
cagatcgaccggatggagctggccgagttcaacgagaagctgctcgccgagggcaagaag
ccgatccagggcgtcccggtcctgctcggcatcaccaaggcgtcgctgcagacccgctcg
ttcatctcggcggcttcgttccaggagaccacccgcgtcctcaccgaggcggcggtcaac
ggcaaggtcgacaacctcgagggcctgaaggagaacgtcatcgtcggctcgctgatcccg
gcgggcaccggcgcgatgatcgccgacatcaagtcgatcgcgcgtcgccgcgacggcctg
atcatggcccagaagtcggcggagagcggcgcggcggtcgccgagcggcttccggcggcc
gagtag
DBGET
integrated database retrieval system
