Microcystis aeruginosa: MAE_11110
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Entry
MAE_11110 CDS
T00647
Symbol
rpoC1
Name
(GenBank) RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mar
Microcystis aeruginosa
Pathway
mar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MAE_11110 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mar03021
]
MAE_11110 (rpoC1)
03400 DNA repair and recombination proteins [BR:
mar03400
]
MAE_11110 (rpoC1)
Enzymes [BR:
mar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MAE_11110 (rpoC1)
Transcription machinery [BR:
mar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MAE_11110 (rpoC1)
DNA repair and recombination proteins [BR:
mar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MAE_11110 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAG00933
UniProt:
B0JSN9
LinkDB
All DBs
Position
960527..962407
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AA seq
626 aa
AA seq
DB search
MKTPTDQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
KIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNAYVVLDPGNAGNLSYKQLLSEDQWLEIEEEIYAEDSE
LVGIEVGIGAEAIQRLLQEINLEEEAERLRTEIVESKGQKRAKLIKRLRVIDNFIATGSQ
AEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSRLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIYQCGLPREMAIELFQPFVIHRLIKLGIVNNIKAAKKMIQRGDANVWHVLD
EVITGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHIPLS
LEAQSEARLLMLACHNILSPATGRPIVAPSQDMVLGCYYLTAENPKAQKGGGRYFASMDD
AIRAFDQGLVDLHASVWLRLPVGEKVKTNKPDEEVLETETLPDGSIWKYYRERKTREKDG
EIISQYVRTTVGRIIYNKTILEALVV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagactccaacagatcaaagatttgattacgtcaaaatcggtttagcgtcccccgag
agaattcggcaatggggagaaagaaccctacctaacggtcaagtcgtcggagaagtaacc
aaaccagaaacgatcaactatcggactcttaaaccggaaatggatgggttattctgcgag
aaaatttttggcccctccaaagactgggaatgttggtgcggtaaatacaagcgcgtccgt
caccggggaattgtctgtgaacgttgcggggtggaagtcaccgagtcgcgggtacgtcgt
catcgcatgggttttatcaaattagccgcccccgtcacccacgtttggtatcttaaaggt
attcccagttatctcagtatcctgctcgatatgcccctgcgggacgtggagcagatcgtc
tattttaatgcctatgtggttctcgatccgggtaatgccggcaatcttagttataaacaa
ctcctcagcgaagatcaatggttagagatcgaagaagaaatctacgcggaggattcggaa
ttagtcggtattgaagtgggtatcggggccgaggctatccaaagactcttacaggaaatt
aacctggaagaagaagcggaaagactgcggacggaaattgtcgaaagtaaagggcaaaaa
cgggcaaaattaattaaacgtctccgggtaatcgataactttatcgccacgggttctcag
gcagaatggatggttttaagcgtaattcccgtgattccacccgatttacgccccatggtg
cagttggacggcggccgttttgccacctctgacctgaacgatctctaccgtcgggtgatt
aaccgcaataaccgtttatcccgtctgcaagaaattctcgccccggaaattatcgtccgc
aacgaaaaacggatgttacaggaggccgtcgatgctttaattgataacggtcgtcgcggt
cgcacggtggtgggggccaataatcgcgccctgaagtctttatcggatattatcgagggt
aaacaggggcgtttccgtcaaaatctcctcggtaaacgggttgactattcgggacgttcg
gttatcgttgtcggtccgaaattgaagatctatcaatgcggtttacccagggaaatggcg
atcgaattgttccaacccttcgttatccatcgtttaattaaattaggcatcgtcaataat
atcaaggcagccaagaaaatgatccaacggggggatgccaatgtttggcacgtcttggat
gaagtgatcacgggacacccggtgatgttaaaccgcgcccctaccctgcaccgtttgggc
attcaagcgtttgaaccgatcttagtggagggccgggcgattcagttacatcccctcgtc
tgtcccgcttttaatgctgactttgacggggaccaaatggccgtacatattcccctctcc
ctggaggcacaatcggaagcgcgcttattgatgttggcctgtcataatattctctcaccg
gcgaccggtcgcccgattgttgccccttctcaggatatggttttgggttgttattatctc
acggccgaaaatcccaaggcccaaaagggtgggggccgttatttcgccagcatggatgac
gctattcgcgcttttgatcagggattggtggatctgcacgcttctgtgtggttgcgttta
ccggtcggagaaaaggtgaaaaccaataaacccgatgaggaagtcctggaaacggaaact
ctccccgatggcagcatctggaaatattatcgggagcgcaaaacccgcgagaaagatggt
gagataatttctcagtatgtgcgtactactgtagggcgaattatctacaataagacgatt
ctagaagctttagtagtctag
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