Microcystis aeruginosa: MAE_15200
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Entry
MAE_15200 CDS
T00647
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mar
Microcystis aeruginosa
Pathway
mar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAE_15200 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mar03019
]
MAE_15200 (rne)
03009 Ribosome biogenesis [BR:
mar03009
]
MAE_15200 (rne)
Enzymes [BR:
mar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MAE_15200 (rne)
Messenger RNA biogenesis [BR:
mar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MAE_15200 (rne)
Ribosome biogenesis [BR:
mar03009
]
Prokaryotic type
rRNA processing factors
MAE_15200 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
AC_N
Motif
Other DBs
NCBI-ProteinID:
BAG01342
UniProt:
B0JV08
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All DBs
Position
1362710..1364869
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AA seq
719 aa
AA seq
DB search
MPKQIIIAEQHHIAAVFWEDQIQELVVATGNQQVADIYLGLVENVIPGIDAAFVNIGDAE
RNGFIHVTDLGPLRLKKTAGAITELLAPQQKVLVQVMKEPTGNKGPRLTGNVTLPGRYLV
LMPNGRGVNLSRRIRSEDERSRLRALAILVKPAGMGLLVRTEAEGKAEEAIIEDLEFLQK
QWESIQQMAVSTRAPALLNRDDDFIQRVLRDMYSADVNRIVVDNPVAVKRVKQQLTNWGG
GKALEGVYIDSHRETQPILDYFRVNAAIREALKPRVDLPSGGYIIIEPTEALTVIDVNSG
SFTRSATARETVLWTNSEAATEIARQLRLRNIGGVVVVDFIDMDSRRDQLKLLELFNKAL
KSDKARPQIAQLSELGLVELTRKRQGKNIYELFGKTCDHCGGLGHLAHLPGEGNAIALET
PTVSRAEKETFIVAPTNTKVLPDKSAPSVAAAEPYLEVFSEFEAEENAQGMDLSFHPNYQ
EQVNNSRRRRRRRPSELLLKEERSEKASTNGVNNEIEPESEPQRFEEKRERPARLSKRGE
DASAAKNIPVSERERVSVEMTPVEQEVYSLMGISPLILVDKEFKDPKSVIVSVKLAGERE
AENPEMPVTPEISLTPTLEVEDTPVEATETGEEAENRSLVRRRRRSTTSEVSQEINQEAS
PPVTFTPEPITTETPVFLGEVIPLETPVSAEVTEEPQLEAETAVLRRRRRRSSATVDES
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacaaataatcatagccgaacaacaccatatagcggctgttttttgggaagat
caaattcaggaattagttgtagccacaggtaatcagcaggtggccgacatctatctagga
ttagtagaaaatgtcatccccgggatagatgcagcctttgtcaatattggcgatgcggaa
cgcaatggctttatccatgtcaccgacctgggtcccttaagactgaaaaaaaccgccggt
gctatcacggaattactggccccccagcaaaaagtgctggtacaggtaatgaaggaaccc
actggcaacaagggaccgcggctaacgggaaatgtcactctccctggtcgttatctggta
ttgatgcccaatggtcgcggggtgaatctttcccgtcgcatccgcagtgaagacgagcgc
tcccgtttacgagctttagcgattttggtcaaaccggcggggatggggttgctggtacgc
accgaggccgaaggcaaagcggaagaggcgattatcgaggatttggaatttctgcaaaaa
cagtgggagagcatccaacagatggccgtcagcaccagggccccggccctgcttaaccgc
gatgatgactttattcaaagggttttgcgggatatgtacagtgccgatgtcaatcgcatt
gttgtggataacccggtggcggtaaaacgagttaaacagcaattgacgaactggggcggc
ggcaaagctctcgaaggggtttatatcgactcccatcgggaaacccagccaattctcgac
tatttccgggttaacgctgccattcgcgaggccctcaaaccccgggttgatttaccctcc
ggcggctacattatcatcgaaccgacggaagctttaacggtaattgatgttaactccggt
tcctttacccgttcggccacggcccgagaaaccgtactctggactaatagcgaggccgcc
acagaaatcgcccgacaactgcgcttgagaaatatcggcggtgtggtggtggtggacttc
atcgatatggattcccgtcgcgaccagttgaaactgctggaattgtttaataaggccctg
aaaagcgataaggcccggccccagattgcccaattatcggaattggggttagtggaatta
actcgtaagcgtcaggggaaaaacatttatgaattattcggcaaaacctgtgaccattgc
ggcggactgggccatttagcccatctacccggagaaggcaacgccatcgccctagaaacc
cccaccgttagccgcgcggaaaaagaaacctttatcgtcgctccgactaatacaaaagtt
ctacccgataagagcgctcctagcgttgcggcggccgaaccctatctagaagttttctcc
gaatttgaggccgaagaaaacgcccaagggatggatctttccttccatcccaactatcaa
gaacaggttaataattctcgccgtcgccgtcgccgtcgtccctcggaactgttactaaaa
gaggaacggagcgaaaaagcctctactaacggtgttaacaacgaaatcgagccggaatca
gaaccccaacgctttgaggaaaaacgagaacgccccgcccgtctctcgaaacggggagaa
gatgccagcgccgccaaaaatatccccgtcagcgaacgggagcgggtttccgtggaaatg
accccggtagaacaggaagtttattctttaatgggcatttctcccctgattctggtggat
aaggagtttaaagacccgaaatcggtgattgtttccgtgaaactggcaggggaaagagaa
gcggaaaacccagaaatgcctgttactcctgaaatatccttgactcctaccctagaagtc
gaggacaccccggtagaagcgacggaaaccggcgaggaagccgaaaatcgttccttggtg
cgccgtcgtcgtcgttccaccactagcgaagttagtcaggaaatcaaccaagaagctagt
ccaccagtgacttttacgcccgaaccgattacgaccgaaactccagtttttctgggcgaa
gtcattcctttagagaccccggtgagcgccgaggtgacagaggagccacaactagaggct
gaaaccgcggtgctgcgtcgtcgtcgtcgtcgttcctccgccactgtcgatgagtcatga
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