Microcystis aeruginosa: MAE_28960
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Entry
MAE_28960 CDS
T00647
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mar
Microcystis aeruginosa
Pathway
mar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAE_28960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mar03019
]
MAE_28960
03009 Ribosome biogenesis [BR:
mar03009
]
MAE_28960
Enzymes [BR:
mar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAE_28960
Messenger RNA biogenesis [BR:
mar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAE_28960
Ribosome biogenesis [BR:
mar03009
]
Prokaryotic type
rRNA helicases
MAE_28960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAG02718
UniProt:
B0JJS6
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All DBs
Position
2638297..2639736
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AA seq
479 aa
AA seq
DB search
MTTGFNNLGLSDSRLQHLETLGFTTPTEIQTKAIPLLLEGHDMVGMSQTGTGKTAAYSLP
LLERMDTKNPNVQALILTPTRELAQQVASAIKDFSDDRRLFILTVCGGQSMERQIRSLEK
GVQIVVGTPGRVIDLLDRKKLHLESLNWVVLDEADEMLSMGFIDDVKKILQASPSTRQTA
CFSATMPREIRDLIANFLKSPISVTVSQPQAAPAKIEQKIYLIPRGWTKLKVLQPLLEIE
PLESAIIFVRTKQTAAELTSKLQEAGQTVDEYHGNLSQVQRERLVQRFREGKIKLVVATD
IAARGLDVENLSHVINYDLPDNAETYIHRIGRTGRAGKTGTAISLVEPIDRRLLRQIEQR
LRQRLESSPIPSRTEVEAKRLAKLQNQLKEALSGERMASFLPLVRDLSEEYDPQAIAAAA
LQMIYDQNCPQWMKTDWEVPAATSSKPVINKTPRSGGSKYPSKSNNRPSLDKKIVFQER
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggtttcaacaatttaggtttatccgatagccgtcttcaacacctagaaacg
cttggattcaccacccccaccgaaattcaaaccaaagccatccctctccttctagaaggg
catgacatggtaggaatgtcacaaacgggaaccggcaaaaccgccgcctattccctgcct
ttactggaacgcatggacaccaaaaatcctaacgttcaagctttaatcctcacccccacc
cgggaattagcccaacaggtggccagcgccatcaaagatttctctgatgatcgtcgtctc
tttatcctgacagtctgtggtggtcaatccatggaacgtcagatccgcagtctggaaaaa
ggtgtccagattgtggtcgggactcccggccgggtaatcgatctgctcgatcgcaaaaaa
ctccatctagaatccctaaactgggtagtcctcgatgaagcggacgaaatgctcagtatg
ggttttatcgatgatgtgaagaaaattctgcaagcatccccctccacccgtcaaaccgcc
tgtttctcggcaactatgccccgggaaatccgcgatttaatcgctaatttcttgaaatct
cccatttctgtgacggtttctcaaccccaggccgctcctgctaagattgagcagaaaatt
tatctgatccctcgcggttggacgaaattaaaagtcctgcaacccctgttagagatcgaa
cccctagaatcggcgattattttcgtccgcaccaagcaaaccgcggccgaattaaccagc
aaactgcaagaagcggggcaaacggtggatgaataccacggtaacttaagccaagtgcaa
cgggaacgactggtgcaacgtttccgcgagggcaaaattaaattagtggtagccacggat
atcgcagcccgcggtctagatgtggaaaatctcagccacgttattaactatgatctgccg
gataatgccgaaacctatattcaccgcattggccgcaccggccgcgccggtaaaacggga
actgctatatctttagtagaaccgatcgatcggcgtttattacgtcagattgaacagcgt
ttgcgtcaacgtctggaatctagtcccattcctagccgcaccgaagtagaagcaaaacgc
ctggccaagctgcaaaatcagctaaaagaggctttatcgggggaacgtatggcttctttc
ttgcctttagtgcgggatttaagtgaagaatacgatccccaagcgatcgcggcggctgcc
ctgcaaatgatctacgatcaaaattgtccccagtggatgaaaaccgattgggaagttccc
gcagcgacgagcagtaaaccggtgattaataaaactccccgcagtggtggtagtaagtac
ccctctaagtcgaataaccgtccttccctggacaaaaaaatcgtctttcaggaacgttaa
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