Marinobacter sp. Arc7-DN-1: D0851_03780
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Entry
D0851_03780 CDS
T05619
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0851_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mara03019
]
D0851_03780
Enzymes [BR:
mara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D0851_03780
Messenger RNA biogenesis [BR:
mara03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0851_03780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
LpdD_chaperone
UvrA_inter
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AXS82236
LinkDB
All DBs
Position
complement(809062..810348)
Genome browser
AA seq
428 aa
AA seq
DB search
MTSDPKHTGDLRFSDLNLDKRLLDAITAIGFEFCTPIQAETLPWTLACEDLIGQAQTGTG
KTAAFLITAIQSLLETPIPETDRCASEPRVLALAPTRELAMQIAKDAEQLCQHTGHNVVT
VVGGMHYDKQRDQLQNEIVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLDMGFI
PDVKRIIRKCTPKDERQTLLFSATFNQDVLNLASMWTSNAEFVEIEPEQKTAERVEQTVY
LVGDDEKLPVLVNFLKRPEVEKALVFANRRDQCRDLEEDLRNQGVKVALMSGEIAQNKRL
KTLDQFKKGSIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGKHGVS
ISFAGEDDSFSLPAIETYISQKLKTAVPDEALMAAMDNPPITRKRGRRPQGQGGRGGQGG
RNQRQRRN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgacccaaaacacaccggcgatctgagattcagtgatctgaacctcgacaag
cgtttgctggatgcgattacggccattggttttgaattttgcaccccgattcaggcagaa
acactgccctggacactagcctgtgaagatctgatcggccaggctcagacgggtaccggt
aagacagcagccttcctgatcacggctatccagagtcttctggaaacgccgattccggaa
acggaccggtgcgcctcagagccccgggttcttgccctggcgccaactcgcgagctggcc
atgcagattgccaaggacgctgagcagctgtgccagcacaccggccacaacgtagtcacg
gtggtgggcggcatgcactatgacaaacagcgcgatcagttgcagaatgagattgtcgat
attctcgttgccacccccggccgcctcattgatttcctgggctcccaggacgtgttcctc
gatcagatcgatatcctgatcctggatgaagccgaccgtatgctcgatatggggtttatt
ccggatgtgaagcggattatccgcaagtgcacgcccaaggacgagcgccagacactgttg
ttcagtgccacctttaaccaggatgtgctgaaccttgcatcaatgtggaccagcaatgcc
gagttcgtggaaatcgagcccgaacagaaaacggccgagcgggtagagcagacggtttac
ctggtgggcgatgacgaaaagctgccggtgttggtgaatttcctcaaacgcccggaagtg
gaaaaagccctggtatttgccaaccggcgtgatcagtgccgcgacctggaagaagatctc
aggaatcagggcgtgaaagtggccctgatgtccggtgaaattgctcagaacaagcgcctc
aaaaccctcgatcagttcaagaagggcagtattcaggtgctggttgccaccgacgttgct
ggccgtggtattcatgtgaacggtgtcacccacgttttcaactacaatcttccggacaat
gccgaggactatgtccatcgcattggccgcaccggcagggctggcaagcatggggtttca
atcagttttgccggtgaggatgactctttctcactgccggccatcgagacttacatcagc
cagaagctgaaaaccgctgtgcctgatgaagcgctcatggcggccatggacaatccgccg
attacccgcaagcgtggtcgccgccctcaggggcagggtggccgcggtggtcagggcggt
cgcaatcagcgtcagcgcaggaactga
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