Marinobacter sp. Arc7-DN-1: D0851_04000
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Entry
D0851_04000 CDS
T05619
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mara
Marinobacter sp. Arc7-DN-1
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mara03000
]
D0851_04000
Transcription factors [BR:
mara03000
]
Prokaryotic type
Helix-turn-helix
Other families
D0851_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_30
AAA_5
HTH_8
AAA_3
AAA_2
Mg_chelatase
AAA
AAA_16
AAA_7
HTH_1
AAA_22
nSTAND3
PAS_7
RWP-RK
IstB_IS21
DUF815
nSTAND6
AAA_14
HTH_20
HTH_22
SoPB_HTH
Rok_N
Motif
Other DBs
NCBI-ProteinID:
AXS82273
LinkDB
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Position
859182..861062
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AA seq
626 aa
AA seq
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MRKNEYSDYRSVIADSWNRCIAWGLDHEHEPAPLESEAGRLEEIQRLYGELLSVTEAEVL
PYYRNVLANSRCLILLADQHATVLNSWGDERITETRLKPWLQTGANWQERNCGTNAIGTA
IAIGAPVQIKRNEHFLKANRSIIGSAAPIFDAHKKITGVLSVFSDAYLPQAHTLGMVRLL
SQSVENRLISRQFGPDHFQITVNTTADNFDSPWSGILACDDSGRIIASNQRADQLLGMPT
VDARLDELFTTHRNHILGHPEQETLQLTTRSRVRLSARLKRPSVTRRNPERADPAGTRGT
GQDLRLPGIDNLEHGDSVVKRCATQSLKVLERGVPVLITGETGVGKEVLVKALHQASHRK
DQPLVAVNCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKAHKGILFLDEIGEMPLS
AQSRLLRVLQERVVTPVGSTESVPVDILLVTATNRPLNSRIDSGHFRPDLYYRINGLCVE
LPSLRNRADRRLLIQNIYGRHRDQGQAEELSPKVLSALENHPWPGNIRQLVNVLRVAIAI
ADGEDIQIWHLPGDFLAEFDLAVNNEASMEGLAPAEPTNSDTEVTDTFARTLQVYHKYTG
NISRAARELAISRNTLYKRLRELGVR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaacgaatactccgattatcggagcgtgattgccgattcctggaaccgttgc
atcgcctggggccttgatcatgaacacgagccagcccctcttgagtcagaggccggccgg
ctggaggaaatacaacgcctgtacggcgagttactgtcagtgaccgaggcagaggtactt
ccctactaccggaatgtgctcgcaaacagtcgctgtctgattctgcttgctgatcaacat
gccaccgttctgaacagctggggcgatgaacgcatcaccgagacacgcctcaagccctgg
ctccagacgggcgccaactggcaggaacggaactgcggaacaaacgccatcgggacagcg
attgccatcggcgcgccggttcagataaagcgcaatgaacatttccttaaagctaaccgc
agcatcatcggctccgccgccccgatttttgacgcccataagaaaattaccggagttttg
agtgtcttcagcgacgcttacctgccccaggctcatactctgggcatggtgcggctgctt
tcacagtcggtggaaaatcggcttatcagtcgccagtttggcccggatcacttccagata
acggtcaataccaccgcggacaattttgacagcccctggtctggcatccttgcctgtgac
gactccggccggattattgccagcaaccagagggcggaccagttgctgggaatgccgacc
gttgatgcgcgccttgatgaactgttcaccacccatcgaaaccatattcttggccatccc
gaacaggagacgctgcaactgacaacgcggagcagggttcggctaagcgcgcggctaaag
cgcccgtctgtgacaagacggaatcctgagcgggcagaccctgccgggaccaggggtacc
ggacaagacctccgcctgccgggtatagacaacctggagcacggggattcggtggtgaaa
cggtgcgcgacccagagcctcaaggtgcttgagcggggcgtaccagtgctgatcaccggc
gaaaccggggtcgggaaagaggtccttgttaaggcactgcaccaggcatcgcatcgaaaa
gaccagcccctggttgccgtgaactgcgcagccattccaccggagctggtggagtcggag
ctgttcggttacgaagcaggtgcttttaccggagcccgggcccagggctccctgggcttc
attcgaaaggcccacaagggcattctgtttctcgatgaaattggtgaaatgcccctgtca
gcgcagtcccgtctgctgcgggtactccaggaacgggttgtcacgcctgtcggctctaca
gagagcgttccggtcgatatcctgctggtgaccgcgaccaatcgccctctcaactcacgc
atcgacagcggccatttccggccagatctctactaccgtatcaacggactgtgtgtagag
ctcccgtcgctccgaaatcgggccgatcgacggcttctgatacaaaatatctatggccgg
cacagagaccagggccaggctgaagagctatcgccgaaagtgctgtctgcccttgaaaac
catccatggccgggcaatatccggcagctggtgaacgtgctgagagtggccatcgctatc
gccgatggtgaagacatacagatttggcatttgcccggggacttcctggcggaatttgat
ttggcagtgaacaacgaggccagcatggagggtctggcgccggcagaacccaccaattca
gatacggaggtaaccgacacgtttgccagaacactgcaggtctatcacaagtacacgggg
aacatttcgcgggcggccagagagctggccatcagccggaataccctctacaagcgcctg
cgggaactcggggtccggtga
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