Marinobacter sp. Arc7-DN-1: D0851_05230
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Entry
D0851_05230 CDS
T05619
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D0851_05230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mara03400
]
D0851_05230
Enzymes [BR:
mara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
D0851_05230
DNA repair and recombination proteins [BR:
mara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D0851_05230
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0851_05230
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0851_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXS82488
UniProt:
A0A346RYR2
LinkDB
All DBs
Position
complement(1126685..1128130)
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AA seq
481 aa
AA seq
DB search
MIRSFYWHDYETFGVDPVHDRPSQFAGVRTDADLNIIEDPLVLYCKPADDYLPSPEACLI
TGITPQKALEDGLPEAQFIARINEAFSQPGTCVVGYNSLRFDDEVTRHTLYRNLRDPYAR
EWQNGNSRWDIIDMVRLTYALRPEGINWPRKEDGSPSFKLEALTVANGITHEAAHDAMSD
VEATIAVAKLIKEKQPRLFDFVLQNKDKHSARSMLDTATMKPVFHISAKYPATRGCCALV
APVADHPTNKNLVIVYDLREDPSELINATPEQIRERVFTSRAGLGEGVSRFPLKGVQLNK
CPVLAPATMLSSLSQARLDELELDGETLRANLAMLRKAPDLPRRIAEAFDQPHESDLTDP
DEQLYAGGFISRTDREKLNWVLEQPVETLGELEVSFEDDRLRELLFRYRARNYPGTLMGE
ELERWEAFRSQRLMHPKKGWRSFEAYARELQRLAADPELTPEKRQVLEDLHLYGESLIPY
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgctctttttactggcacgattacgaaaccttcggtgtagatccggttcatgac
aggccttcccagtttgccggtgtgcggacggatgcggatctgaacatcatcgaggatccg
ctggtgctttactgcaagccggcggacgattacctgccatcaccggaagcctgcctgatt
accggtattaccccgcaaaaagcgctggaagacgggctccccgaggcccagttcatcgcc
cggatcaacgaagccttcagccagcccggcacctgcgtggtgggctacaacagcctgcgc
ttcgacgacgaagtcacccgccacaccctgtaccggaacctgcgcgatccctacgcccgt
gaatggcagaatggcaattcccgctgggacatcatcgatatggtgcggctgacctacgcc
ctgcgcccggaaggcatcaactggccccgcaaggaagacggcagccccagtttcaaactc
gaggcgctgacagtcgccaacgggatcacccatgaagccgcccacgatgccatgtcggat
gtggaggcgaccattgccgttgcaaagctgatcaaggaaaagcaacccaggctgtttgat
ttcgtgctgcagaacaaggacaagcactccgcccggtccatgctcgacaccgccaccatg
aagccggtgttccacatatccgccaagtacccggcgacccgtggatgctgtgccctggtt
gctccggtggcagaccaccccaccaacaagaacctggtgattgtctacgacctgcgggaa
gaccccagcgagctgatcaacgccacccctgagcagattcgtgagcgggtgtttacttcc
cgggcgggactgggggagggcgtgagccgctttccgctgaaaggcgtgcagctgaacaaa
tgcccggtgctggcgccggcgaccatgctttcctccctttctcaggcgcggctggacgaa
ctggaactggatggcgaaaccctgcgggccaatctggccatgctgcgcaaggcgccggac
cttccgcgcaggattgccgaagcctttgaccagccccacgaaagcgacctcaccgacccg
gacgaacagctctacgccggcggctttatcagcaggaccgaccgggagaagctgaattgg
gtactggagcagccggtggaaacgctgggggagctagaggtcagctttgaggatgaccgc
ctgcgggaactgctgttccgttaccgtgcaaggaattacccgggcaccttgatgggcgaa
gagctcgagcgttgggaggcgttccgtagtcaacggttgatgcatcccaagaagggctgg
cgatctttcgaggcctacgcccgggaattacagcgcctggcggcggatccggaattgacg
ccggagaagcggcaggtgctggaggacctgcatttgtacggggagtctttgattccgtac
atctga
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