Marinobacter sp. Arc7-DN-1: D0851_05885
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Entry
D0851_05885 CDS
T05619
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mara03009
]
D0851_05885 (rimO)
Enzymes [BR:
mara01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D0851_05885 (rimO)
Ribosome biogenesis [BR:
mara03009
]
Prokaryotic type
ribosomal protein modification factors
D0851_05885 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXS82603
LinkDB
All DBs
Position
complement(1262115..1263467)
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AA seq
450 aa
AA seq
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MTDNTQNPATETGNGKVGFISLGCPKALVDSERILTQLRLDGYNVVSTYDDADIVVVNTC
GFIDAAKQESLDAIGEAISENGKVIVTGCMGVEADKIRETHPGVLAVSGPHAYEEVVGAV
HQFVPQKKQHDPFTDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG
DVMDEAQRLVDAGVKELLVISQDTSAYGVDTKYRTGFWQGRPLKTKMQSLCEALGEMGVW
VRLHYVYPYPHVDDIIPLMAEGKILPYLDIPFQHASPKVLRAMKRPAHDSKTLERIRRWR
DICPELTIRSTFIVGFPGETEEDFQYLLDWLDEAQLDRVGAFKYSPVEGAKANELEGAVP
EEVKEARLARFMEKQAKISAARLQAGIGQTIDVLIDEVDEEGAIGRSKADAPEIDGMVYL
NDETDLVPGEIVQAVVEHADEHDLWARLVR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaacacccagaaccccgctacagaaaccggtaatggcaaggtcggctttatc
agccttggctgccccaaggccctcgtggactcagagcgtatcctcacccaactccggctc
gatgggtataacgtagtctccacctatgacgacgccgatatcgtggtggtgaatacctgt
ggctttattgatgctgccaagcaggaatccctggatgctattggcgaggccatcagtgaa
aacgggaaagtcatcgtcaccggctgcatgggtgtcgaagccgacaagatccgcgagacc
caccccggcgttctggcggtttccggtcctcatgcctatgaagaagtggtcggtgcggtt
caccagttcgtgccccagaaaaagcaacacgatccgttcaccgatctggtcccgccccag
ggcatcaaactgaccccgaggcattatgcctatctgaaaatttccgagggctgcaaccac
cgctgcaccttctgcatcatcccctccatgcgcggcgatctggtcagccggcccatcggc
gatgtgatggacgaagcccagcgcctggtggatgccggcgtcaaggaactgctggtgatt
tcccaggacacttctgcgtatggtgtcgataccaaataccgcaccggcttctggcagggc
cgcccgctgaaaaccaaaatgcagtcgctgtgcgaggccctgggtgaaatgggcgtgtgg
gtgcgtttgcactatgtgtatccctatccccatgtggacgacatcatcccgctgatggcc
gaaggcaagatcctgccgtacctggatatcccgttccagcacgccagcccgaaagtcctc
agggccatgaaacgcccggcccacgacagcaaaaccctggagcgcatacgcaggtggcgg
gacatctgcccggaactgaccatccgctcaacgtttatcgtcggcttccccggcgaaacc
gaggaagatttccagtacctgctggactggctcgacgaagcccagctggaccgcgtgggc
gcgttcaaatacagcccggtggaaggtgccaaggccaacgaactggaaggtgcggtgcct
gaggaagtgaaagaagcgcgcctggcccgcttcatggaaaaacaggctaagatttccgcc
gcccgcctgcaggccgggatcggccagaccatcgacgttctgatcgacgaagtggacgaa
gaaggcgccattggccgttccaaagccgatgcgccggagattgacgggatggtctaccta
aacgatgagacggatcttgtgcccggtgagattgttcaggccgtggttgagcatgccgat
gagcatgatctttgggcccggcttgttcggtag
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