Marinobacter sp. Arc7-DN-1: D0851_07585
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Entry
D0851_07585 CDS
T05619
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
mara
Marinobacter sp. Arc7-DN-1
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mara03400
]
D0851_07585
DNA repair and recombination proteins [BR:
mara03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
D0851_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_16
AAA
AAA_30
SLFN-g3_helicase
AAA_22
DUF7577
DZR
Zn_ribbon_3
T1R_D3-like
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AXS82906
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Position
complement(1604675..1606477)
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AA seq
600 aa
AA seq
DB search
MIQCFGPPFKLRPYQQEAVDATLNHFRQSDESAVIVLPTGAGKSLVIAELARLARRRILV
LTHVKELVEQNHAKYQSYGLTGGVFSAGLQRKEIRHQVTFASVQSVSANLDQFRGEYSLV
IIDECHRVSGEDTSQYQRIIELLRQQNDALKVLGLTATPYRLAMGWIYRYHYRGFVRGSS
EEQDKPFQHCIYELPLSYMINRGYLTKPELVNAAVAQYDFSALAQDRFGEVAEKDVNQLL
SKHQRVTRAIIEQVMELAVERKGVMIFAATVDHAREITGYLPEHQTALVTGATDLNERAL
LIQRFKQRQLKYLVNVSVLTTGFDAPHVDFIAILRPTQSVSLYQQIVGRGLRLDEGKQDC
LVIDYAGNHVNLHHPEVGEPKPNPDSEPVQVFCPGCGFANIFWGKTDSEGRVIEHYGRRC
QGLLEPAEGDEDAGQNGRPEQCDYRFRFKECPHCGGENDIAARNCGQCQKAIIDPDDQLR
DALKLKDAMVIRCAGITLSALNSKTGSKLRITYHGEDGEELSEFFDFGKPAQRTVFNTLF
GRRFANSQAPKTFSRTDEVLEMQALLTAPDFVIARKQKRYWQVQERIFDYQGQYRKANEG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgattcagtgttttggcccgccattcaaactccggccctaccagcaggaagcggtcgac
gccacgctgaatcatttccgtcaatcggatgaatctgccgttatcgtgctgccaaccggc
gcaggcaaaagcctggtcattgccgagctggcccgtcttgcccggcgcaggattctggtg
ctgacccacgtaaaagagctggtggagcagaatcacgccaaataccagagctatgggtta
acgggcggcgtcttctccgccgggctgcagcgtaaggaaatccggcatcaggtgaccttc
gccagtgtgcagtcggtatcggcgaatctggatcagttccggggtgaatactcgctggtc
atcatcgatgagtgccaccgggtcagcggtgaggataccagtcagtatcaacggatcatc
gagctgctgcggcaacagaatgacgccctgaaagtgcttgggctcaccgccacaccctat
cgattggccatgggctggatctatcgctatcactaccggggctttgttcgcggttccagt
gaagaacaggataagccctttcagcattgcatttatgagctgccgttgagctacatgatc
aatcgggggtatctcacgaagcctgagttggtgaacgcggcggtggcgcaatacgatttc
tccgcgctggctcaggaccgctttggcgaagtcgccgagaaggacgttaaccagctgctg
agcaaacatcagcgtgtgacccgtgccatcattgagcaggtgatggagctggccgttgag
cgcaagggggtgatgatctttgcggcaacggtggatcatgcgcgggagatcaccggctat
ctgccggaacaccaaaccgccctggtgaccggcgcgaccgatctgaatgaacgggcgttg
ctgattcagcgcttcaaacagcggcagttgaagtatctggtgaatgtgtccgtgctcacc
acgggctttgacgcgccccacgtggactttatcgccattcttcggcccacccagtcggtc
agcctgtatcagcagatcgtgggccgcggacttcgtctggacgagggcaaacaggattgt
ctggtgatcgattacgcgggcaaccatgtgaatctgcatcatccggaggtgggggagccg
aaaccgaaccccgacagtgaaccggtgcaggtgttctgcccaggctgtggttttgccaat
atcttctggggcaagacagacagcgaaggccgtgttatcgagcactacgggcgccgttgt
cagggcctgctggagcctgcggaaggggatgaagatgccgggcagaacgggcgccctgaa
cagtgcgattaccgttttcgtttcaaggagtgcccccactgcggtggcgagaatgatatt
gcggcccgtaactgcgggcagtgtcaaaaagccattatcgacccggatgatcagctgaga
gatgccctgaaactcaaggatgccatggtgatccgttgcgccgggatcacgttaagcgct
cttaatagcaaaaccgggagcaaactgaggatcacctatcacggtgaagatggggaagaa
ctcagcgagttttttgatttcggcaagccggcgcagcgtaccgtctttaacacgctgttt
gggcgtcgtttcgcgaatagccaggctccgaaaacgttcagcaggacggatgaggtgctt
gagatgcaggccttgttgactgcgccggattttgtcattgcccgcaagcagaaacgctat
tggcaggtgcaggaacggatttttgattatcaggggcagtatcgtaaggcgaatgaaggg
taa
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