Marinobacter sp. Arc7-DN-1: D0851_09310
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Entry
D0851_09310 CDS
T05619
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0851_09310 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mara03019
]
D0851_09310 (pnp)
03016 Transfer RNA biogenesis [BR:
mara03016
]
D0851_09310 (pnp)
Enzymes [BR:
mara01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D0851_09310 (pnp)
Messenger RNA biogenesis [BR:
mara03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D0851_09310 (pnp)
Transfer RNA biogenesis [BR:
mara03016
]
Prokaryotic type
tRNA degradation factors
D0851_09310 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
APC_15aa
Motif
Other DBs
NCBI-ProteinID:
AXS85247
LinkDB
All DBs
Position
complement(1977052..1979172)
Genome browser
AA seq
706 aa
AA seq
DB search
MDLKPFKKSFELGGKTVTLETGRIARQATGSVLVTVDDISVLGTVVGAKEAKPGQPFFPL
TVNYFEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVITTVMS
SSKNQDPDIAAMLAASAALSISGIPFDGPIGASRVGYTNERGYFLNPTFEELQTSLLDMV
VAGTEDAVLMVESEAKGLTEDQMLGGVLYAHQEMQVAVAAIKEFAAEIGKPRWDWQPAAE
NTELLNAVKAEASAAIEEAYGIRDKMERYARLGEIKTALVEKLAGEEEGQPSADEVKKYF
GKVEKAIVRHQVIEGKPRIDGRDNKTVRPIEIEVGVLPSVHGSALFTRGETQAIVTTTLG
TSRDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPT
LEEFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEDDKFAI
LTDILGDEDHLGDMDFKVAGTQEGVTALQMDIKINGITDEIMELALEQAHAARLHILGEM
NKVISAPRAELSSRAPSITTIKINPEKIRDVIGKGGSMIRSICDETGASIDLDDDGNVKI
YADNQEAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISDR
RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEIKEGDQPTDFSA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggatctgaaacctttcaagaaatcgtttgagcttggcggcaagaccgtcactctggaa
accggccgtattgcccgccaggccaccggttcggtgctggtaaccgttgatgatatttcg
gtgctcggtaccgttgttggcgccaaggaagccaagcctggccagccgtttttcccgctg
accgtgaactacttcgagaagacctacgccgtgggcaaaatccccggtggtttcttcaag
cgtgaaggtcgtccttccgagaaggaaaccctgacgtcccgcctgatcgaccgtccgatt
cgtccgctgttcccgaacggcttcatgaacgaagttcaggtcattaccacggtcatgtcc
tccagcaagaatcaggatccggatattgccgcgatgctggccgcctcggcggcgctgtct
atctccggcatcccgttcgatggcccgatcggcgcctcccgcgttggttacaccaacgag
cgcggctacttcctgaacccgacgtttgaagagctgcaaacctccctgctggacatggtg
gtggccggtaccgaagacgcggttctgatggttgagtccgaagccaagggcctgacggaa
gaccagatgctgggtggtgttctgtacgcccatcaggaaatgcaggtggccgtagccgcg
atcaaggaatttgccgctgaaatcggcaagccgcgctgggactggcagccagcggcagag
aacactgagctgctgaatgccgtcaaggccgaggcctccgcagccatcgaggaagcctac
ggcattcgcgacaagatggagcgctacgcgcgtctgggcgaaatcaagacggcactggtt
gaaaaactggccggcgaagaggaaggtcagccttccgcggatgaagtcaaaaagtatttt
ggcaaggtggagaaagccatcgttcgtcatcaggttattgagggcaagccccgcatcgat
ggccgtgacaacaaaaccgttcgcccgatcgaaatcgaagtgggtgttctgcccagtgtt
cacggttccgccctctttacccgtggcgagacccaggccatcgtgaccactacgctgggt
acctcccgcgatgtgcagatcattgatgccctggaaggcgagcgtaaggacccgttcctg
ttccactacaacttccctccgtattcggttggtgaagcaggccgtgttggcaccccgggc
cgtcgtgaggttggtcatggtcgtctggccaagcggggcgttctggcggttatgccgact
ctggaagagttcccgtatgcaatccgtgcggtttccgagatcactgaatccaacggttcc
agctccatggcttcggtctgtggttccagcctggcgctgatggatgcgggtgtgccgatc
aaggcaccggttgccggtattgccatgggtctggtcaaggaagacgacaagtttgcgatt
ctgaccgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggttgccggt
acccaagagggcgtgactgccctgcagatggatatcaagatcaacggcatcaccgacgag
atcatggagcttgctcttgagcaggcgcacgcagcccgtctgcacattctgggcgagatg
aacaaggttatctccgctccccgcgccgagctgtcttcccgtgcgccgagcatcaccacc
atcaagatcaatccggagaagatccgtgacgttatcggtaagggcggttccatgattcgc
tccatctgtgacgaaaccggtgcttccattgatctggatgacgacggtaacgtgaagatc
tacgcggataaccaggaagcagcccaggcggcggtgaaccgggtgaaggaaatcactgcg
gagatcgaggttggcgctatctacaagggccgcgttgagcgcattgtggacttcggtgcc
ttcgtcaatatcctgcctggcaaggatggtctggtgcacatttcccagatttctgatcgc
cgcatcgagaatgtgactgacgagctgagcgaaggtcaggaagttctggttaaggttctg
gatgtcgacaaccgtggccgcgtcaagctgtccatgaaggaaatcaaggaaggcgaccag
ccgaccgatttctctgcctga
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