Marinobacter sp. Arc7-DN-1: D0851_10875
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Entry
D0851_10875 CDS
T05619
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mara
Marinobacter sp. Arc7-DN-1
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mara03021
]
D0851_10875 (rapA)
Transcription machinery [BR:
mara03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D0851_10875 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
Tudor_RapA
ResIII
DEAD
Cas3-like_C_2
RSLD_CPSF6
Motif
Other DBs
NCBI-ProteinID:
AXS83499
LinkDB
All DBs
Position
complement(2314585..2317443)
Genome browser
AA seq
952 aa
AA seq
DB search
MDTSEFVIGQRWVSHSDTGLGLGIVTDISGRRVTLGFPAADEERTYAIDNAPLSRIIYQV
GEEIETFEGERYIVRAVEDLGGVLMYHADDGTDLHEISEVKLAGSVNFSAPHQRLFAGQF
DRNGAFRLRFATLQHMNRLRGSPAQGLIGARTQHLPHQIYIAHEVARRHAPRVMLADEVG
LGKTIEAGLILHYQLHTGRAKRALIVVPDSLTHQWLVEMLRRFNLRFSILDQSRYDTLKD
EESDVDALVNHIFGGDDSVNPFESDQLVLCSLDFLVNSLQAREDALRADWDLMIVDEAHH
LAWSPGQVSPEYQVVEELSAISRGLLLLTATPEQVGVASHFARLRLLDPARFHDLEAFRE
EEQQYEVINNVVRRLQDERSDISAGDRKLLQAWLGEELDQLLAGDAPRQSVIDALLDRHG
TGRVLFRNTRAAIQGFPERRPAPAPLPCPDIYKGQVSGMQGLAPEQLVSEERWLADDPRV
AWLEKKLASLRPAKAVVICARAETAMALEHYLQLRAGIRSAAFHEHLSLLERDRAAAYFA
DSEQGAQALICSEIGSEGRNFQFAHHLVLFDLPANPDLLEQRIGRLDRIGQTEAIDIHIP
YLQGTSQEVQFRWFHEGLNAFAESCAVGVAVQEAVQSQWQKAIEGDTDAIELVRATAEES
QRLKTLLQNGRDALIELNSCRRDVAEGLIAAIEEEEGEVRVRDYMMEAFDILGVDVEDHA
DHSDILRPGEQYQAGHVAELPEDGITVTWDRRNALEREDLAFMSWEHPMVTGVMDSVTSS
GLGKAALASLSVKALPAGTLLMEALFTVHCPAPDALQLTRYLPVSPLRLLVDVNGKELSG
ALPHDRLNDLCSNIRRRTAQAIVPQIRPEVETMVDHVERLSKPHLEPLKAQALDQLAASF
EPEIRRLEALQRVNPAIREEEIDYFRGQFEAARDAIGHASLALEGIRVIVTA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
ttggatacatcggaatttgttatcggtcagcgttgggtcagccacagtgatactggcctg
gggttggggattgtcacggacatctctggccgaagggttaccctgggattccctgctgcc
gatgaggagcgcacctatgcaattgataacgcaccgctttcccgcatcatttatcaggtc
ggggaggaaattgagacctttgagggtgagcgttatatcgtgcgcgcggtcgaggatctc
ggtggcgtgctgatgtatcacgcggatgatggcactgacctgcacgaaatctccgaagtg
aagctggccggatcagtgaatttctcggccccgcaccagcggctgtttgcgggtcagttc
gaccgaaacggcgcctttcgtctgaggttcgccacactccagcacatgaatcgcctgcgt
gggtccccggcccaggggctgatcggtgcccgtacccagcatctgccgcaccagatctac
atcgcccatgaggtggcaaggcgccatgcgccgagggttatgctggcagacgaggtgggt
ctcggcaaaaccatcgaagcaggcctgatcctgcactaccagcttcacaccgggcgggca
aagcgcgcactcatcgtagtgccggattccctgacgcatcagtggctggtggaaatgctc
cggcgcttcaacctgcgtttttcgatcctggaccagagccgctacgacaccctgaaagat
gaagaaagcgatgtcgatgcgctggtaaaccacatcttcggcggcgatgactctgtcaat
cccttcgaaagcgaccagttggtgctttgcagcctcgacttcctggtgaacagcctgcag
gcccgtgaggatgccctccgggccgactgggacctgatgattgtggacgaggcccaccat
ctggcctggagcccggggcaagtcagccccgaataccaggtggtggaagagctttcggcg
atcagtcgtggcctgttgctgctgacagcgacccccgaacaggtcggtgtggccagtcac
tttgcccggttgcggttactggaccccgcgcgttttcacgatctggaggcattccgggag
gaggaacagcagtacgaggtcatcaacaacgtggtccgaaggctgcaggacgagcgttcc
gacataagcgcgggcgatcgaaaactgctgcaggcctggctgggtgaggagctggatcag
ttgctggccggtgatgccccccgccagtcggtgattgatgccttgctggatcgccatggc
accggccgcgtgctgttccgtaacacccgggcggcgattcaagggttccccgagcgtcgt
ccggcccccgcgcccttgccatgcccggatatctacaaggggcaggtctccggaatgcag
ggactggcgcccgagcagttggtatctgaggaacgatggttggcagacgatccccgggtg
gcctggctggagaaaaaactggccagcctgcgtcccgccaaggcagtcgtcatctgcgcc
cgcgccgaaaccgctatggcccttgaacactatctccagctacgcgccggtatccgcagt
gccgcattccatgagcaccttagccttcttgagcgcgaccgggctgcggcctattttgcg
gatagtgaacagggtgcccaggcgctgatctgttccgagatcggcagtgagggccggaac
ttccagttcgcccatcacctggtgctgtttgatctgcctgccaatccggatctgctcgag
cagcgcatcggtcgcctggaccggatcggccagaccgaagccattgatatccatattcct
tacctgcaagggaccagccaggaagttcagttccggtggttccacgaaggtttgaatgcc
tttgccgaaagctgtgcggttggcgtggcggttcaggaggctgtccagagccaatggcag
aaggccatcgagggtgacaccgatgctattgagctggtcagggccacggctgaagagtcg
cagcgtctgaaaacgctgctccagaacggccgtgatgcgctgattgaactcaattcctgc
cgccgggatgtggctgaaggtctgatcgccgccattgaggaagaagaaggtgaggtccgg
gttcgtgactacatgatggaggccttcgacattctcggggtggatgtggaagaccacgct
gatcattccgacattctccgccccggtgagcaataccaggccggtcacgtggccgagttg
ccggaagacggcataacggtgacctgggatcgccggaatgccctggaacgggaagatctg
gcctttatgagctgggagcacccgatggtgaccggggtgatggattcggtcaccagttcc
ggcctgggcaaggcggccctggccagtctgtctgtgaaagcgctgccggcgggtactttg
ctgatggaggcgctgtttactgtgcactgtcccgccccggatgccctgcagctgacccgc
tacctgccggtctcgccgttgcgactgctggtggatgtgaacggcaaggagttatccggt
gcgttgccccatgaccggttgaacgacctgtgctcaaacatccgccggcgcacggcccag
gccatcgtgccgcagattcgtcctgaggttgaaaccatggtggatcatgtggagcgtttg
tccaagcctcaccttgagcccctgaaggcgcaggcccttgaccagctagctgccagcttt
gaaccggagattcgcaggctggaagcgctgcagagggtaaatccggcgattcgtgaagag
gaaatcgactatttccggggccagttcgaggcggcccgggatgccattggccatgccagt
ctcgccctggaaggcatccgggtgatagtgactgcgtaa
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