Marinobacter sp. Arc7-DN-1: D0851_13325
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Entry
D0851_13325 CDS
T05619
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0851_13325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mara03400
]
D0851_13325
Enzymes [BR:
mara01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D0851_13325
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D0851_13325
DNA repair and recombination proteins [BR:
mara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0851_13325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
PSMbeta
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AXS83916
UniProt:
A0A346S2U0
LinkDB
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Position
complement(2836524..2837336)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHCEGQTIVGVTVRNSGLRWPVPADLGERLRGQMIRSIDRRAKYL
FLNVDQGTVIVHLGMSGSLRIITDDTPPMAHDHIDLALQSGVILRFNDPRRFGCWLWADS
VTDHPLISHLGPEPLAPEFNGAMLFRRSRGKNTPVKSFIMDNHVVVGVGNIYANEALFKS
GIHPRRKAGRISRDRYHRLAEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLLVYGR
GGEPCKECETPLKEIRMNNRATVYCPRCQH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaactgcctgaagtcgaaaccacccgccgcggtattgcgccccattgcgaaggc
cagaccattgttggcgttactgtacgaaacagcggcctgcgatggcccgttccagcggat
ctgggcgagagactcagggggcagatgataagaagtatagaccggcgtgcgaaatatttg
ttccttaatgtggaccagggaacggtgattgttcacctgggcatgtccggcagcctccgg
atcattactgatgacacaccacctatggcccatgaccatattgacttggcactacaatcc
ggtgtcattctgcggttcaacgatccccggcgctttggctgctggctctgggccgactcc
gtcacagatcacccgctgatcagccaccttggacctgaacctctggcgccggaattcaac
ggtgcgatgctgttccggcgttcccgaggcaaaaacaccccagtgaagtccttcatcatg
gacaatcatgtggtggtgggcgttggcaacatctacgccaatgaagccctgttcaaatcg
ggcatacacccccggcgcaaggcgggtcgcatcagccgggaccgctatcaccggctggct
gaggccattcgggagaccctcagcgcagccatcctgatgggcggcaccaccctgagagat
ttcgtcaacagcgacggcaaacccggctacttcgcccagtctcttctggtgtatggccgt
ggcggagaaccctgcaaggaatgcgaaaccccgctaaaagaaattcgcatgaacaaccgt
gccacggtttactgcccccgctgccagcactga
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