Marinobacter sp. Arc7-DN-1: D0851_16405
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Entry
D0851_16405 CDS
T05619
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0851_16405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mara02022
]
D0851_16405
02035 Bacterial motility proteins [BR:
mara02035
]
D0851_16405
Two-component system [BR:
mara02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D0851_16405
Bacterial motility proteins [BR:
mara02035
]
Pilus system
Twitching motility proteins
D0851_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
VpsR
AAA_16
HTH_30
AAA_5
AAA_19
nSTAND3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AXS84466
LinkDB
All DBs
Position
complement(3491496..3492884)
Genome browser
AA seq
462 aa
AA seq
DB search
MTTYTALIVDDEPDIRELLEITLTRMGITTFTAPDLTSALALLEQNKPNLCLTDMNLPDG
NGIELVQWIQQHAPATPVAVITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALK
LSEPKADSEDGADEPGLLLGKSPEIRKLRNQTRKLARSQAPVFISGESGSGKELVARMIH
LQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRIN
VIELAVPPLRERLDDIPILAGHILERIAGEYECDPATLTPAAIERLKSYDFPGNVRELEN
VLERAFTLCDADQIDADDLHLGNGVQHAASPSQIIAEGQAGEGENFTVPDGEIDLEGYLE
SIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatacacagcgctgatcgttgacgacgaaccggacatccgggaactgctggaa
atcaccctcacccgaatgggcataaccaccttcacggcacccgacctgaccagcgctctg
gcgctgctggagcagaacaaaccgaacctctgcctcaccgacatgaacctgccggacggc
aatggtatcgaactggttcagtggatccagcagcatgctccggcaacaccggtggccgtc
attaccgcctacggcaatatggacacggcgattgaatccctcaaagccggggctttcgat
tttgtttccaagccggtggaactgccccgcttaagagagctggtaaacagtgcgctcaag
ctctcggagcccaaggcggactcggaagatggagccgacgagcccggcctgctactcggt
aaatctccggagatccggaaactccggaaccagacccgaaagctggccagaagccaggcg
ccggtattcatcagtggtgagtccggcagtggtaaggaactggttgcccgaatgattcac
cttcagggcccccgccgggagggacctttcattgccgtgaactgtggtgcgattccctcg
gaactcatggagagtgaattcttcgggcacaagaaaggcagctttaccggggctgtggaa
aacaaggacggcctgttccgctctgccaacggtggcactctgtttctggatgaagtcgca
gacctgccgctggccatgcaggtgaaactgctcagggccatccaggaaaaagcggtccga
ccagtaggtgacaccaaggaagtaccggtagatatccgggtgctgagcgccacccataaa
aacctgccggaactggttcaggaaggcagcttccgccaggacctgttctaccggattaac
gtgatcgaactggctgttccgcctttgcgggagcggctcgatgatatccccatactcgcc
ggccacattcttgaacgtattgccggagagtacgaatgcgatccggccacgttaactccc
gctgcgatagagcgcctcaagagctacgattttcccggaaacgtgcgggaattggagaat
gttctggaacgcgcgtttaccctgtgcgatgccgaccagattgacgctgacgatctgcat
ctcgggaatggtgtacagcatgccgcatcgccctcacagattattgccgagggccaggcc
ggcgaaggtgagaattttaccgtgccggatggtgaaatcgatctggaaggatacctggaa
agcatcgaacggcaagcgattgagaaggctctggaggcgacccgctggaacaagacggcg
gcggcgaagcggttggggatcagttttcgggcgttgcggtatcgattgaagaagttgggg
atggagtaa
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