Marinobacter sp. Arc7-DN-1: D0851_17375
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Entry
D0851_17375 CDS
T05619
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mara
Marinobacter sp. Arc7-DN-1
Pathway
mara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0851_17375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mara03019
]
D0851_17375
03400 DNA repair and recombination proteins [BR:
mara03400
]
D0851_17375
Enzymes [BR:
mara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0851_17375
Messenger RNA biogenesis [BR:
mara03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0851_17375
DNA repair and recombination proteins [BR:
mara03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0851_17375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
ETF
Motif
Other DBs
NCBI-ProteinID:
AXS84636
LinkDB
All DBs
Position
complement(3690737..3692848)
Genome browser
AA seq
703 aa
AA seq
DB search
MNTQTDKANAENLLQTTLATPNATFREGQWEAIDALVNQRQKLLVVQRTGWGKSSVYFIS
TKIFRDRGLGPTIIVSPLLALMRNQIESARNLGIVAETMNSTNTDDWQAVTRRMLNNEID
CLLISPERLANDRFIETVLEPIADRIALMVIDEAHCISDWGHDFRPDYRRIVSILKQLPA
NTPVLGTTATANNRVVADIQTQLGDIKIQRGPLTRESLALQTLVLPDQASRLAWLAQVIP
ILAETGIVYTLTVRDAEQVAQWLNAQGIDAKAYHGSIEAEGFENSNSYRQHLETQLLNNN
LKVMVATTALGMGYDKPDLGFVIHYQAPGSIVAYYQQVGRAGRGIDRAFGVLMSGTEDGD
IHEFFRDSAFPSQAHVHEILQVLAQSDGLSIRSIEEQTNLRHGQIEKVLKLLSVENPAPV
VKMGSQWRRTAVPFAMNQARIDHLTHQREQEWTEVQDYLEETGCKMAFLRHALDDNDTTP
CGKCASCLGAPVINQPIDPALAHQAATFLKHAEMVIAPKAQVAANAFAEYGFKGNLPQEL
RAQEGRVLSRWGDAGWGRMVADQKHAGRFSDELVDALAEVILQRWQPNPAPEWVCCVPSR
NHPELVPDFARRLATKLNLPFVDSVAKIKDNQPQKGQQNRFHQCRNLDGAFAIAEGIPNT
PVLLVDDIVDSGWTLTVIAALLQQSGSGVVYPVALASSSVKDS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcagactgacaaagccaatgccgaaaacctactacaaactaccctcgccacc
cccaacgcgacattccgcgagggccagtgggaagccatcgatgccctggtcaatcaacgg
cagaaactgctggtggtccagcgcaccggctggggcaaaagttcggtgtactttattagc
accaagatcttccgggaccgaggcctggggccaaccatcattgtctcgcccctgctggcc
ctgatgcgcaaccagatcgaatcggcccgcaacctcggcattgtggccgagaccatgaac
tcaaccaacacggacgactggcaggcggttacccggcgaatgctgaacaacgaaatagac
tgcctgctgatatcgcccgagcgcctggccaatgatcgttttatcgagaccgtactggaa
cctattgcggatcggattgctttgatggtgattgacgaggcccattgtatttctgactgg
ggccacgacttccgtccggattaccggcgcattgtgagcattctcaaacagttgccggcc
aatacaccggttctgggtaccacggcaacggccaacaatcgcgtggttgccgacattcag
acccaactgggcgatataaagattcaacgggggccgctgacccgggaaagcctcgcgctg
caaacgctggttctgccagaccaggcttcacgcctggcgtggctggcccaggtgatcccg
attttggccgaaaccggcatcgtttacacgctgaccgtgcgggatgccgagcaggtcgcc
caatggctgaatgcccagggcatagatgcaaaggcctatcatggcagtattgaggcggaa
gggttcgaaaacagcaacagctatcgccagcacctggaaacacagctgctgaacaataac
ctcaaggttatggttgccacgaccgcattgggaatgggttacgacaagccggacctcggt
ttcgtgattcactatcaggccccgggttcgattgtggcttactaccagcaggtagggcgt
gccggccgaggcatagaccgtgcctttggggtgctgatgtccggtaccgaggatggcgat
attcacgagttcttccgggattccgccttcccttcccaggctcatgtgcatgaaattctg
caggtgttggcacaaagcgacggactatcgattcgtagtatcgaggaacagaccaacctg
cgccacgggcagatcgagaaagtgctcaagttactgagtgttgagaacccggcaccggtc
gtcaaaatgggcagccaatggcgcagaaccgcggtgccctttgccatgaatcaggcccgg
atcgaccatctgacccatcagcgggaacaggaatggaccgaggtacaggactacctggaa
gaaaccggctgcaagatggcctttctgcgccacgcactggatgacaacgacaccacgcct
tgtggaaagtgcgcctcctgccttggggcaccggtgatcaaccagccgattgacccggca
ctcgcacatcaggcggcaacgttcctgaaacacgccgaaatggtcattgcgcccaaagcc
caggtcgcggccaatgcctttgcggaatatggtttcaaaggcaacctgcctcaggaactg
agagctcaggaaggccgcgtgctgtcccgctggggtgacgccggctggggccgcatggtt
gcggaccagaaacacgccgggcgattcagcgatgagctggtggatgctctggcagaagtg
atcctccagcgctggcagcccaatcctgctccggaatgggtttgttgtgtaccctcgcgc
aatcatccggagctggtgccggatttcgcccgccgcctggccacaaagctgaacttgccg
ttcgtggattcggtcgccaagatcaaggataaccaaccccaaaaggggcaacagaatcgc
tttcatcagtgccgtaacctggatggcgcctttgcgatagccgaaggcataccaaatacg
ccggttcttcttgtagatgatattgttgattcaggctggacgctcaccgtcatcgcagct
ttgctacaacaatcgggcagcggcgttgtttatccggtcgcactggcttcttcttcggta
aaagactcatga
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