Maribacter cobaltidurans: CJ263_01095
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Entry
CJ263_01095 CDS
T05023
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
marb
Maribacter cobaltidurans
Pathway
marb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ263_01095 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marb03019
]
CJ263_01095 (rny)
Messenger RNA biogenesis [BR:
marb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJ263_01095 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ASV28940
UniProt:
A0A223V1A8
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Position
complement(280939..282507)
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AA seq
522 aa
AA seq
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MDSTMIIIAGIVGLAIGFGIAKFMEKGKASKTIANAKKDAAQILKEAKVEGENIKKDKIL
QAKEKFLELKAEHEKVIIGKDKKINEAEKRTRDKESQVSSELARNKQLNSQLENKIKEVE
HKQEFFEKKQAEVDKLHKSQVQQLEVISGLSAEEAKSQLIESLRDTAKTDAMGYIQTTLE
EAKLTAQQEARKIVINTIQRIGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALESAT
GVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVKKTEKQIEAEIV
EIGKRTVIDLGIHGLHPELIKAVGRMKYRSSYGQNLLQHSREVAKLCGVMASELGLNPKI
AKRAGLLHDIGKVPNTEAEVETPHAILGMQWAEKYGEKPEVCNAIGAHHDEVEMKTLISP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFGGVQKAYAIQAGRELRVIVESEK
VSDEKAAQLSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatagtacaatgattataatagcgggtattgtgggtttggccattggttttggcatt
gccaagtttatggagaaaggcaaggcctccaaaacaatagcaaatgcgaagaaggatgcg
gcccaaattttaaaggaggccaaggttgaaggtgagaacataaagaaagataagattcta
caggcaaaagaaaagttcctggagttaaaggcagaacatgaaaaagtaataataggaaag
gacaagaaaatcaatgaagcggaaaagcgaacaagggataaggaatcccaagtgagtagt
gagctggcaagaaacaaacaattgaattcccaactggagaacaagatcaaggaggttgag
cataagcaagagttctttgaaaagaaacaggcagaagtcgataagcttcataaaagtcag
gttcagcaattggaagttatttccggattatcggcggaggaggcaaaaagtcagttgatt
gaaagtcttcgggataccgccaagacggatgccatgggctatatccagactactttggaa
gaagcaaagcttactgcccagcaggaagctaggaaaatagtaatcaataccattcaaaga
ataggtacggaagaagctgttgaaaactgtgtttcggttttcaatatagaatccgatgac
gttaaaggtagaatcataggtagggaaggaagaaacataagggccttggaatctgctact
ggtgtagaaattattgtagatgatacgccagaggccatcatattgtcatgctttgattcc
gttagaagggaagtggctagattatcgctccacaagttggtgacggacggtagaatacac
ccggcaagaatagaggaagtcgttaaaaagaccgaaaagcaaattgaggcggaaatcgtg
gaaatcgggaaacggacggtaatagatctgggaattcatggactacatccagaattgata
aaggccgttggaagaatgaaatatcgctcgtcttatggtcagaacctattgcagcattcc
cgtgaagttgccaagctctgcggtgtcatggcttcggaattgggtcttaacccaaaaatt
gctaaaagggccggactgttacatgatataggaaaagtacccaacacggaagctgaggta
gaaactccgcatgcaattttaggtatgcagtgggcggagaaatacggagagaaaccagag
gtatgcaatgccattggggcccaccacgacgaggttgaaatgaaaacactcatttcacct
attgtacaggtttgtgatgcgatcagtggtgcacgtcctggggcaaggagacaggttttg
gattcctatatccaacgacttaaggatttagaagaaattgcctttggttttggaggcgtg
caaaaagcatatgccatacaggccggtagggagctaagagtaattgtggaaagtgaaaag
gtaagtgatgaaaaggctgcacaactttcatttgagatttcccaaaaaatacaaacggat
atgacctatcctgggcaagtaaaggttactgtaattagggaaaccagagcagttaatgta
gccaagtaa
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