Maribacter cobaltidurans: CJ263_01590
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Entry
CJ263_01590 CDS
T05023
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
marb
Maribacter cobaltidurans
Pathway
marb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ263_01590 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marb03019
]
CJ263_01590 (recQ)
03400 DNA repair and recombination proteins [BR:
marb03400
]
CJ263_01590 (recQ)
Enzymes [BR:
marb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ263_01590 (recQ)
Messenger RNA biogenesis [BR:
marb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CJ263_01590 (recQ)
DNA repair and recombination proteins [BR:
marb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJ263_01590 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
CCDC32
Motif
Other DBs
NCBI-ProteinID:
ASV32504
UniProt:
A0A223VAV8
LinkDB
All DBs
Position
complement(377503..379701)
Genome browser
AA seq
732 aa
AA seq
DB search
MSLNEIDIHGALKKYFGFSQFKGLQEGVIKNVLKGNNTFVIMPTGGGKSLCYQLPALMQE
GTAIVVSPLIALMKNQVDAIRGVSAEMGIAHVLNSSLNKTEIKQVKKDIMDGTTKLLYVA
PESLTKEENVEFLRSVRVSFVAVDEAHCISEWGHDFRPEYRNLKSIVGRLGDDIPIIGLT
ATATPKVQEDIIKNLGIGDATVFKASFNRPNLFYEVRTKTENVDADIIRFVKQNEGKSGI
VYCLSRKKVEELAQVLQVNGISAVPYHAGFDAKTRSKYQDMFLMEDVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMSGKPVAEQ
EIGNALLQEVVAYAETSMSRRKFMLHYFGEEFDEENGEGADMDDNTRNPKEKVEAMDDAV
KLLKVVQGTSEKFKSKEIVNTLRGKNNALISSHKTNEKEFFGIGSDKDKSHWMALKRQML
VAGYFKKDIEQYGVIRITEKGRDFLKNPHSFMMTKDHVYNAENDNAIVGAAKSGGVADEK
LLKQLKDLRKSQANKLGVPPFVVFQDPSLEDMALKYPVTLEELLNVHGVGEGKAKKYGKP
FVAFIASYVEENDILRPDDLVVKSTGANSGLKLYIIQNVDRKLPLDDIASAKGLDIPELI
KEMEQIVYSGTKLNLDYWIDEVLDEDQQEEIHEYFLEAESDNLEEAMKEFDGEYEDEELR
LYRLKFISEVAN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
ataagtttgaatgagattgatatacatggcgcattaaaaaagtattttggtttttctcag
tttaaaggacttcaagaaggcgttataaaaaatgttttaaagggtaataatacctttgtt
attatgccaacgggcggaggaaagtccctttgctatcaattaccggccttaatgcaagag
ggtaccgccatagtagtttcccctttaatagctttaatgaaaaatcaagttgatgcgatt
cgaggcgtttctgccgagatgggaattgcccatgtgcttaattcctccttgaacaaaacc
gaaataaagcaggttaaaaaggatattatggatggtaccacaaaattactctatgttgca
cctgaatccttgaccaaggaggaaaatgtggaatttttacgttccgttagagtttccttt
gtagccgtagatgaagcccattgcatttctgaatggggacatgattttagacctgaatat
aggaatcttaaatccattgttggtcgccttggagatgatattcccatcataggattgacg
gcaacggcaacgccaaaggttcaggaagatatcattaagaatctgggtataggggatgcc
accgtattcaaggcatctttcaacagacccaatttattttatgaggtaaggacaaagaca
gaaaacgtggatgcggatatcattcggtttgttaaacagaacgagggtaagtcgggcatt
gtttactgtttaagccgtaaaaaggtagaggaacttgcacaagtgcttcaagtaaacggt
attagtgccgtaccttatcatgcgggttttgatgccaagacacgatctaaatatcaggat
atgttcttgatggaggatgtagatgtcgttgtggcgaccattgcttttggaatgggaata
gacaaaccggatgtgcgatttgtaatacatcatgatattcctaaaagtattgagagctac
tatcaggaaacaggtagggccggcagggatgggggcgaaggacactgtttggcattctat
tcctataaagatgtggaaaagctggagaaattcatgtcgggaaaaccggttgcggaacag
gaaataggaaatgcacttttacaggaggtggtggcctatgcggaaacctctatgtctcgc
cgaaaatttatgcttcattattttggggaggagtttgacgaggagaacggggaaggcgca
gatatggacgacaataccagaaaccccaaggaaaaggtagaggctatggacgatgctgtc
aaattgttgaaggtggtccaaggaacaagtgaaaaatttaagtctaaggaaatagtgaat
acactacgaggaaagaacaatgccttgatcagttcacataagaccaatgaaaaggaattt
tttgggattggttccgataaagacaaaagtcattggatggccctgaaaagacaaatgttg
gtggcaggctattttaaaaaggatattgagcaatatggcgtaattcgtattaccgagaaa
ggccgggattttctaaagaatccccattcattcatgatgacaaaagatcatgtttataat
gccgaaaatgacaatgccatcgtaggtgccgcaaagtccggtggtgttgccgatgaaaaa
ttgctcaagcaattaaaagatttaagaaagtcacaggccaataaattgggagttccccct
tttgtggtcttccaagatccatcccttgaggatatggcgcttaaataccctgtcactctg
gaagaacttctcaacgttcacggagtcggggagggaaaggcaaagaagtatggaaagcct
tttgttgcttttattgcctcgtatgtggaagaaaatgacattctccgtccggatgacctt
gtggtcaagagtacgggggccaattcaggcttgaaactgtatattatccaaaatgtggat
aggaagctgcccttggatgatatcgcttcagcaaaaggattggacataccggaacttatc
aaggaaatggaacaaattgtatacagcggcaccaagctcaacttggattattggatcgat
gaggttttggatgaggaccaacaagaagaaatccatgaatattttctggaagccgaaagt
gataacctagaagaggccatgaaggagttcgatggggaatatgaggatgaggaattgcgg
ctatatcgtcttaaattcatcagcgaggtagctaattag
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