Maribacter cobaltidurans: CJ263_03480
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Entry
CJ263_03480 CDS
T05023
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
marb
Maribacter cobaltidurans
Pathway
marb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ263_03480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marb03021
]
CJ263_03480
03400 DNA repair and recombination proteins [BR:
marb03400
]
CJ263_03480
Enzymes [BR:
marb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJ263_03480
Transcription machinery [BR:
marb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ263_03480
DNA repair and recombination proteins [BR:
marb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ263_03480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
ASV29357
UniProt:
A0A223V283
LinkDB
All DBs
Position
complement(807518..808510)
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIDSSDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGHAITSVRID
KVEHEFSVISGVVEDVTEIILNLKQVRFKKQIEDSEAEVVSISVSGKEQLTAGDFQKFIS
GFQVLNPDLVICNMDPKISINMEITIDKGRGYVPAEENKKSGAPIGTIAVDSIFTPIKNV
KYSIENYRVEQKTDYEKLVFEIVSDGSIHPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttaattttcagaaacccgataaagtaataatgatcgattcctcagacttc
gaaggaaagttcgaatttcgtcctttggagcctggttatggattaactgttgggaatgca
cttagaagggtattgctttcttcattggaaggccatgccattacatccgtaaggattgat
aaagttgaacatgagttctccgtaatttcgggtgttgtagaagatgttaccgaaattatc
ctaaacttgaagcaggttcgtttcaagaaacaaatcgaggattctgaagcagaagtcgtt
tcaatttccgttagcggaaaggaacaattgacagcaggggattttcaaaaattcatttca
ggtttccaagtgctgaatccagacttggtgatttgtaacatggatcccaagattagcatc
aatatggaaatcactattgataagggtagaggttatgtccctgcagaggaaaacaaaaag
tccggtgcgccaatagggactatagcggtcgactctatctttactcccataaagaacgta
aaatacagcatcgaaaactatcgtgtagaacagaaaactgactacgaaaaattggttttt
gaaattgtttccgatggttcaattcaccctaaggatgccttgaccgaggctgcaaaggtt
cttatccatcattttatgttgttctccgatgagcgtatcactctggaagcagatgagatt
gctcaaacagagacctatgatgaggaatcgttacatatgagacaattgttgaagaccaaa
ttggtagatatggatctttcggtccgtgccttgaactgtttaaaggctgctgaagttgat
actttaggagacttggtgtccttcaacaagaacgatttaatgaagtttagaaactttggt
aaaaaatccttaacagagcttgaggagttggttatcaacaagggccttagttttggaatg
gatttgtcaaaatataaattagataaggattaa
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