Maribacter cobaltidurans: CJ263_08835
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Entry
CJ263_08835 CDS
T05023
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
marb
Maribacter cobaltidurans
Pathway
marb03410
Base excision repair
marb03430
Mismatch repair
marb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CJ263_08835 (recJ)
03430 Mismatch repair
CJ263_08835 (recJ)
03440 Homologous recombination
CJ263_08835 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marb03400
]
CJ263_08835 (recJ)
DNA repair and recombination proteins [BR:
marb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CJ263_08835 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CJ263_08835 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CJ263_08835 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASV30312
UniProt:
A0A223V4S9
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All DBs
Position
2024458..2026146
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AA seq
562 aa
AA seq
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MRWTIKPKPEQSKIDSLADALGVDDIVAHLLLQRGISTFEEAKKFFRPQLEDLHDSFLMK
DMDLAVSRIEKAISESENILIYGDYDVDGTTAVALVSSYLLSYYPNVATYIPDRYDEGYG
VSYKGIDFAEDNGFSLIIALDCGIKAIEKVEYASKKGIDFIICDHHRPDSVLPPAVAVLD
PKREDCTYPYDELCGCGVGFKLVQALGSRRGETIDDLVFYLDLVATAIGADIVPITGENR
ILAFYGLQVINQSPRAGFKAIIQQVKKTTLTITDVVFIIAPRINAAGRMEHGQYAVNLLM
EKDVSIAMGFAAEIEKFNTDRRGLDQEITEEALLQIQENKEEDCFTSVVFREDWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVKGFDVYNALERCSDCIEQFGGHKYAAGLT
LLEGQYEVFKEQFEQVVKDTIDPTLLTPEITVDAKIELKDITPKLMRILKQFAPFGPGNM
APVFMAEKLTDTGYARTVGQEGAHLKVSVTQEGSHKIDGIGFNLGDKLSKVTSRRPFNAV
FSIDENEWQGNISLQLKLRDIQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggacaataaaaccaaaacccgaacaatctaaaatcgactctttagccgatgcc
ttgggtgtggatgatattgtcgcacatttattgcttcagcgcggaatttccacgtttgag
gaggccaaaaaattttttcgcccgcaattggaggatttacacgattcttttttgatgaag
gatatggatttggccgtttcaagaatagaaaaggccatttccgaaagcgagaatatttta
atttatggggattatgatgtggacggtactacggccgtggcgcttgtctcgtcttatcta
ctttcctattatcccaatgtggccacctatattcctgacagatacgacgagggttatggg
gtttcctataagggtatcgacttcgccgaggataatgggtttagcttgatcattgccttg
gattgtggcatcaaggctattgaaaaggttgaatatgcctccaaaaaaggaatcgatttt
atcatctgtgaccaccatagaccggattcggttttacccccggcggttgcggtattagac
cccaaaagagaggactgtacctatccttatgatgaactttgtggctgcggggtaggattt
aaacttgtacaggccttaggttcccgacgaggggaaactatagatgatttagtgttttat
cttgatttagtggctactgccataggcgcggatatcgttccgataactggagagaatcga
atactggcattttacggcttgcaggttatcaaccaaagtccgcgagccggctttaaagcg
ataattcaacaggtaaaaaagacaacgcttaccattaccgatgttgtttttatcattgcc
cctaggattaatgccgccgggcgtatggaacatggtcaatatgcggtaaatctacttatg
gaaaaagatgtgtcaattgccatgggatttgccgcagagattgaaaaatttaatacggat
agaagaggattggatcaggaaataaccgaggaggcgttattgcaaattcaggaaaataag
gaagaggattgttttacttctgtagtatttcgggaagattggcataaaggggttattgga
attgtagcttcgcgattgaccgaaacctattataggccaaccttggtttttacaaaaagc
ggtgataaattggcggcctcggcccgatccgtaaaagggtttgatgtgtacaatgccttg
gaacgttgttcggattgtatcgagcaattcggggggcataaatatgctgcggggcttacc
ctcttggagggacagtatgaagtttttaaggaacaatttgaacaagtggtcaaggatacc
atagacccgaccttattaactccggagattacggtggacgccaaaattgaattaaaggac
atcactcctaaactcatgcgcattttgaaacagtttgcaccttttggtcccggcaacatg
gctcctgtatttatggctgaaaaattaacggacacaggatatgcgagaacagtaggacaa
gaaggggcacatttaaaggtttcggttacgcaagagggtagccataagattgatgggatc
gggtttaatttaggggataaactttcaaaagttaccagtagaagaccttttaatgcggta
ttttccatcgatgagaacgagtggcagggaaacattagtttacaacttaaacttcgtgat
attcaatga
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