Maribacter cobaltidurans: CJ263_14395
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Entry
CJ263_14395 CDS
T05023
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
marb
Maribacter cobaltidurans
Pathway
marb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ263_14395 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marb03021
]
CJ263_14395 (rpoC)
03400 DNA repair and recombination proteins [BR:
marb03400
]
CJ263_14395 (rpoC)
Enzymes [BR:
marb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJ263_14395 (rpoC)
Transcription machinery [BR:
marb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ263_14395 (rpoC)
DNA repair and recombination proteins [BR:
marb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ263_14395 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
tRNA-synt_1c_C
Motif
Other DBs
NCBI-ProteinID:
ASV31306
UniProt:
A0A223V7P8
LinkDB
All DBs
Position
3240208..3244506
Genome browser
AA seq
1432 aa
AA seq
DB search
MARIKDNNQVKRFDKISIGLASPEAILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKGPEGEEIQKMDFLTEEEYLNILESIPQENQY
LEDTDPNKFIAKMGAECLIDLLGRINLKDLSFELRHKANTETSKQRKTEALKRLQVVEAL
RESQDNRENLPEWMIMKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLV
EIKAPEVILRNEKRMLQEAVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPEMKLFECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVCTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASHNILNPANGSPITVPSQDMVLGLYYMTKERISTPEA
PVKGEGLTFYSAEEVEIAFNEGKVALNAGIKVRAKDFNEEGELVYQIIPTTVGRVLFNME
VPEAAGYINKVLNKKSLRDIIGDILSVTDVPTTADFLDKIKTMGYDFAFKGGLSFSLGDI
IIPAEKHDMIADANGQVDGIMANYNMGLITNNERYNQVIDVWTSTNAMLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIINIEDCETLRGVEVQALKKNE
EIVETLGERILGRVSLHDVYDPITEELLLTAGQEIMESDVKKIEASPVETVEVRSALTCE
AQQGICAKCYGRNLSTNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LEAKFSGIAEIEDLRTVKGENSDGKPVDIVISRTSEIKVVDGKTGITLSTNNIPYGSQLF
IEDGAKIQKGDLICSWDPYNGVIVSEFPGKIAYENIEQGVTYQVEIDEQTGFQEKVISES
RNKRLIPMLLIQDSKGETLRSYNLPVGSHIMVDDGDKIKEGKILVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEIKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILAIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIEDPGDTIFLENQLIHKDDFIIENDEIFGKKVVMEAGDSENLKPGQIVTLREL
RDENSVLKRNDKALVEARDAVAATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKVDTLEGLKENVIVGHKIPAGTGMRDYENIIVGSKEEYDEIMARKEALRF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggctagaataaaagataataatcaagtaaaaaggtttgataaaatttcaatcggattg
gcttcgccggaagcaattttggcagagtccagaggtgaggttctaaagcctgaaacaatt
aactatagaacgcacaaaccagaacgtgacggattgttctgtgagcgtatattcggacct
gtaaaggactacgaatgtgcctgtggtaagtataagagaatccgttaccgtggtattgtt
tgtgaccgttgtggtgtagaagttactgagaaaaaggtacgtagggatagagtaggtcac
atcaatttggtagttccggttgcccacatttggtatttccgttccttgcctaacaaaatc
ggttatttgctaggtcttccttccaagaaattggatatgatcatttactatgaaagatat
gtagtaattcaacccggtattgcaaaaggacctgagggtgaggaaattcagaaaatggat
ttcttgaccgaagaggagtatttgaacattttggaatccattccacaggagaatcaatac
ttggaggataccgatccaaataagttcatcgcaaagatgggtgccgagtgtttgatcgat
cttttgggaagaatcaatttgaaggacctttcttttgaattgagacataaggcaaatacg
gagacttcaaaacaaagaaagaccgaagctttaaaaagacttcaagtggttgaggctttg
agggaatctcaggataatcgtgaaaacctacccgagtggatgatcatgaaagtgattccg
gtaattccaccagaattacgtccattggttcctttagatggtggtcgttttgcgacttcc
gatttgaacgatttatatagaagggtaattatcagaaataaccgtctaaaaagattggta
gagataaaagctcctgaagttattcttagaaatgagaaacgtatgcttcaagaagctgtt
gattcactttttgataacaccagaaaggcttcagcggttaaaacggagtctaaccgacca
ttaaaatcgctttcagattccttgaaaggtaaacaaggacgattccgccagaacctattg
ggtaaacgtgtggattattcggcacgttcggttatcgtagttggaccagaaatgaaattg
ttcgaatgtggtcttccaaaagatatggctgctgagctatacaaaccttttgtcattaga
aaattgattgaaaggggtattgtaaagaccgttaagtctgccaaaaagattatagataag
aaagaacctgttgtttgggatattcttgaaaatgtattgaaaggacaccctgtattgttg
aaccgtgctcctacattgcaccgtttgggtatacaggcgtttcagccaaaattaatagaa
ggtaaagcaattcgtctgcatccattggtatgtacagccttcaacgcggattttgatggt
gaccagatggctgttcacttgccattgggaccagaagctattttggaagctcaattgtta
atgttggcctcccataatattttgaacccggcaaatggttctccaattacggtaccttcc
caggatatggttttgggtctttattatatgactaaagagcgtatatccactccagaggca
cctgtaaagggagaagggttaactttctattctgcggaagaggttgaaattgctttcaat
gaaggtaaagtagccttgaatgcaggaattaaggttagggccaaagattttaatgaagag
ggagaactggtataccaaatcattccaactactgtaggaagggtattgttcaatatggaa
gtgcctgaagctgccggatatattaataaagtattgaacaagaaatccttaagggatatt
atcggggatattttatccgttactgatgtgcctacgactgccgatttcttggataagatt
aaaactatgggatacgatttcgcctttaagggtggattgtcctttagtttaggtgatatt
atcattccagcggagaaacatgatatgattgccgatgccaatggccaggtcgatggtatt
atggccaattataacatgggtcttataaccaataacgagcgttataatcaggtaatcgat
gtttggacttctacaaatgccatgttgacagaattggcgatgaagcgtattagggaagac
caacaaggattcaactcggtatatatgatgttggattctggtgcgaggggctccaaagag
cagattcgtcagttgacaggtatgcgcggattgatggcgaaacctaaaaaatctactgcc
gggggtggtgaaattattgaaaaccctattctttctaactttaaggaaggtctttcaatt
cttgaatattttatctccacacacggtgcacgtaaaggacttgcggatactgcccttaaa
acggcggatgcaggttatcttacacgtcgtttggtggacgtttcacaggacgttattatc
aatatagaagattgtgaaactttaagaggtgttgaagttcaggcacttaaaaagaatgaa
gaaatcgttgagaccttaggggagcgtattttaggacgtgtgtcattacatgatgtctac
gatccaatcactgaggagctattattgactgccggtcaggaaatcatggagtccgatgtt
aagaaaattgaggcttctcctgtagaaacggtagaggtaagatctgcattgacttgtgag
gcgcaacagggaatctgtgccaagtgttatggtagaaacctttctactaataaaatggta
caaagaggtgaagctgttggtgttgttgctgcccaatccattggtgagcccggtactcag
ttgacattgcgtaccttccacgtgggtggtattgcaggaaacatatccgaggataataag
cttgaggctaaattctccggtattgcagaaattgaggacctaagaacggtcaaaggtgaa
aactctgatggtaagccagtagatatcgttatttctagaacatctgaaattaaggtagta
gacggtaaaacgggtatcaccctaagtacaaataatattccttatggttcacagctcttc
atcgaagatggggctaaaatccaaaaaggagatttgatttgttcatgggatccatataac
ggagttatcgtttccgaattcccaggaaagattgcctatgagaatattgagcaaggtgtt
acctatcaagttgagatagatgagcaaactggtttccaagaaaaggtaatctctgaatct
agaaataagagattgataccaatgttgcttatccaagacagtaaaggagaaacattacgt
tcctataaccttcctgttggttcgcatattatggtggacgatggagataaaatcaaagag
ggtaaaatcttggttaaaatacctcgtaagtctgccaaggcaggggatattaccggtggt
cttccaagggtaaccgaattgttcgaagcacgtaatccttctaatccggctgttgtttcc
gagattgacggtgttgtttctttcggtaagattaaaaggggtaaccgagaaatcattatc
gaatccaaattgggagagataaaaaaatatttggtaaaactatctaaccagattcttgtt
caagaaaatgactacgttagagctggtatgccactttccgatggttccattactccagag
gatattttggccatcaaaggtccatcggctgtacagcaatacttggttaacgaggtgcag
gaagtatatcgtttacaaggtgtaaagattaacgacaagcactttgaggttgttgttaga
cagatgatgcgtaaagtaagaatagaagatccgggagatactattttcttggaaaaccaa
ttgattcataaagatgattttatcattgaaaatgatgagatttttggtaagaaagtagta
atggaagccggtgattctgaaaaccttaaaccaggtcaaatcgttactctaagagagcta
agggatgaaaactcggttcttaaacgaaatgataaggcattggtagaagcaagggatgca
gttgctgcaacagcaactcctatactgcaaggtatcacgagagcttcgttgcagaccaag
tcatttatatcagcggcctccttccaagagacaaccaaggtattgaatgaagcggccgtt
agtggtaaagtggatactttggaaggtctgaaagaaaatgtaatcgtagggcacaaaata
ccggcaggtactggtatgagggactatgagaacataatcgtaggatctaaagaagaatac
gatgaaatcatggctagaaaagaagccttaagattctaa
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integrated database retrieval system
