Maribacter cobaltidurans: CJ263_20555
Help
Entry
CJ263_20555 CDS
T05023
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
marb
Maribacter cobaltidurans
Pathway
marb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
marb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ263_20555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marb03400
]
CJ263_20555
DNA repair and recombination proteins [BR:
marb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ263_20555
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJ263_20555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_25
MeaB
cobW
Viral_helicase1
BCA_ABC_TP_C
PRK
AAA_15
NMDAR2_C
Exo84_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ASV32431
UniProt:
A0A223VAN2
LinkDB
All DBs
Position
4571135..4573969
Genome browser
AA seq
944 aa
AA seq
DB search
MINYEENIEVKGARVHNLKNIDVTIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEVYDFLRLLFARAA
DAHSYNTGEKMVSYSDEQIRNLIIDTYKDKKINVLAPIIKSRKGHYRELFEQIAKQGFVK
VRVDGEIRDIVKGMKVDRYKTHDIEIVIDRLKVQESEELHKRLAETINTAMYSGDNVLMV
LEEGSDVPRYFSRDLMCPTTGISYPTPEPNTFSFNSPKGMCPNCSGLGHVYEVNEDKIFP
NKKLSIKNGGIAPLGDYKKSWAFKQIETIAQRYGFELTDPINKLPTEAIEILLNGGNESF
EVDSKSLGVKRTYKIDYEGISNFIKSQYDQAESTSIKRWAREYMDKIKCPSCEGTRLKKE
SLYFKIDDRNIAELANMDIAELANFFEGLEKTLEGNQLKIAEEIIKEIRTRIRFLLDVGL
DYLSLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNSRLIKSLESLR
DIGNSVIVVEHDRDMIERADHVIDIGPKAGKHGGEIISQGTPEDLKNHHTLTADYITGVK
EIKVPKKRRTGNGKKIVLSGCTGNNLKNIKVEFPLGKMIGVTGVSGSGKSTLINETLYPI
MNAHYFNGVKKPMPYKKITGLEHIDKVIDINQSPIGRTPRSNPATYTGVFSEIRSLFTKT
PEASIRGYKPGRFSFNVKGGRCETCQGGGLRVIEMNFLPDVYVECETCNGKRFNRETLEI
RYKGKSISDVLEMTINEAVDFFEAIPKIHRKLKTIQNVGLGYISLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNKLVNKGNTVLVIEHNLDVIKMV
DHVIDIGYEGGRSGGKLIATGTPEEICEVEDSYTAEFLRKELKI
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattacgaagaaaatattgaggtaaaaggagcgcgcgtccataatctgaaaaat
atagatgtaactattccaagggagaaacttgtcgtgataacgggtctttccggtagtggt
aaatcatccttggcctttgacacgatttatgccgaaggacagcgtagatacatagagaca
ttttccgcgtatgcccgtcagtttttgggtggattggaaagaccggatgtagataaaata
gatggattatcccctgtaattgccatagaacaaaagactacctcaaaatctcctagatct
accgttggtaccatcacggaagtttacgatttccttagattgctttttgcccgtgcggcc
gatgcgcatagctataatacaggagaaaaaatggtaagctacagtgatgaacaaatcagg
aatttgattatcgatacttataaggataagaaaattaatgttctggctccgattataaaa
tcgagaaaaggacattacagggaactgttcgagcaaattgccaagcagggattcgtaaag
gttcgggtagatggtgagataagggacattgtcaagggcatgaaggtcgatcgatacaag
acccatgatattgaaatagttattgacagactaaaagttcaggaaagcgaggagttgcat
aagcgactggcagaaaccatcaatactgccatgtatagcggtgataatgttttgatggta
cttgaggaaggttctgatgttccaagatattttagtagagaccttatgtgcccaaccaca
ggtatctcctaccccaccccggaacctaatacattttcctttaactccccaaagggaatg
tgccccaattgtagcggtttgggccatgtttatgaagtcaatgaggacaaaatattcccc
aacaaaaaactctccataaaaaacggaggtatagcgccattgggggattataagaaatca
tgggcttttaaacagattgagaccatcgcacagcgatatggatttgagctcacggaccca
atcaataaattaccaacagaggccattgaaattctcctgaacgggggaaatgaaagtttt
gaggtagattccaaatcattgggcgtaaaaagaacatataaaattgattacgaaggaatt
tccaattttatcaaaagccagtatgaccaagcggaatcaacatccataaagcgatgggcc
agggaatacatggataaaataaaatgtccctcctgtgaaggaacccgtctcaaaaaggaa
tcactatattttaaaattgatgacaggaatattgcagaattggccaatatggatattgcc
gagttggccaatttttttgaaggtcttgaaaagaccctcgaagggaaccaattgaagatt
gcggaggagatcatcaaggaaattcgcaccagaattcgctttcttttagatgtaggcctg
gattacctttccctgaaccgtagctcaaaatcattatctggcggtgaggcacaaagaatc
cgcttagcgacccagataggctctcaattggtaggtgtactttacattttggacgaacct
agcatcggcttgcaccaaagggacaattcccgtcttattaagtccttggagtccttgagg
gacattggtaactccgttattgttgtggagcatgatagggacatgatcgagcgtgcagac
cacgttattgatataggaccaaaggcaggtaagcatggaggggaaataatttcccaggga
acgccagaagaccttaaaaatcatcatacacttactgcggactacattaccggagtaaaa
gaaataaaagttcctaaaaagcggagaacgggaaatggtaaaaagatagttctttctggt
tgcacaggaaataatttaaaaaatattaaggttgaatttccattagggaaaatgataggg
gttactggagtatccggaagtggtaaatccaccttaatcaacgaaaccctctatcctatc
atgaacgcccattatttcaatggtgttaaaaaaccaatgccttataaaaaaattacgggc
cttgagcatatagataaggtaatcgacatcaaccaatctccaattggcagaacaccgcgc
tccaatccggccacctacactggggtattcagtgagattcggtcgttgttcaccaaaact
cccgaagcgtccatacgaggctataaaccgggtagattcagttttaatgtgaaaggagga
agatgcgaaacttgccaaggtggagggttaagggtaattgaaatgaattttctgcctgat
gtctatgtagaatgtgaaacctgtaatggtaagcgatttaatagggaaacactagagata
cgatacaagggtaaatccatttccgatgtattggaaatgaccatcaacgaggcagtggat
ttttttgaggccatacccaaaatacatagaaagctaaaaaccattcaaaatgtgggattg
gggtatatttccttgggtcagcaatcaacaacactttctggtggtgaagcacaaagaatt
aaattggccactgaactatccaaaagggatacgggaaataccttttatattttggacgaa
ccaacaacaggtttgcattttgaggatataagggtacttatggaagtattgaacaagctg
gtgaataaagggaatacggttttggttattgaacataacttggatgtaataaaaatggta
gaccacgttattgatataggatatgaaggtggtcgatcaggtggcaagttgattgctacc
ggaaccccggaagaaatttgtgaggttgaagacagttatacggcagagtttttgagaaaa
gaattaaaaatataa
DBGET
integrated database retrieval system