Methanogenic archaeon ISO4-H5: AR505_0056
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Entry
AR505_0056 CDS
T04272
Name
(GenBank) DNA-directed RNA polymerase subunit A'' RpoA2
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AR505_0056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marc03021
]
AR505_0056
Enzymes [BR:
marc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AR505_0056
Transcription machinery [BR:
marc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AR505_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AMH93778
UniProt:
A0A110A208
LinkDB
All DBs
Position
67236..68747
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AA seq
503 aa
AA seq
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MAQKDTIAALVKRGIADEVATTVVKQYGYGSLGDISSAGVDGLVEKGLDEAVAKEIIDKI
GTRKAPKSRAPKVVVAEEPEAPAEPQVPQEEYSNPHVETETESKLMGMAASLKLEIPKKV
IYDIADRIEGAELTDDVCEKLLIRAAEMYASHKMVQNESAGVMAAHSIGEPGTQMNLRTF
HFAGVASVSVTQGLPRLIEIVDARREPSTPSMNIPLKGLAQEDQAIAEHVASEIEITTLL
DVASIETDITNMRILIIPDATKMDRRGLTVDDIVEKLNKIKAVRGLVEKSAVSFDGPNND
VACNIIISSDPENPAPFTKLQEMYEAIKNARLKGVEGIKRALIHPDPKTGQYSIITEGSN
LKEILQVEGVDVDNVMTNSIIEIADVFGIEAARNSIIHEATSTLGNAGLDVDVRHIMLVA
DLMTNDGTVRAIGRNGVSGKKSSVLARAAFEITAAHLLHAAMVGEVDKLEGVTENIIVGQ
PVTLGTGAIKLYYDPKANKEDIE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaagataccatcgcagcattagtgaagaggggtattgccgacgaggtcgca
accaccgtcgtgaaacagtacggatacggcagcctcggagacatttcctccgcaggagtc
gacggactcgtcgagaaaggtctcgacgaggcagtcgccaaggagatcatcgacaagatc
ggtacccgcaaggcccccaagtcccgcgctcccaaggtagtcgttgccgaggagcccgag
gctcccgccgagccccaggtaccccaggaggagtactcaaacccccacgtggagaccgag
accgagtccaagctcatgggcatggcagcatccctgaaactcgagatccccaagaaggtc
atctacgacatcgccgacaggatcgagggagcagagctcaccgacgacgtctgcgagaag
ctcctgatccgtgcggccgagatgtacgccagccacaagatggtccagaacgagtccgcc
ggagtcatggcggcccactccatcggagagcccggtacccagatgaacctgcgtaccttc
cacttcgcgggagtcgcatccgtgtccgttacccagggtcttccccgtctcatcgagatc
gtggatgccaggcgcgagcccagcaccccttcgatgaacatccccctcaagggactcgca
caggaagaccaggcaattgccgagcacgttgcatccgagatcgagatcaccactctgctg
gacgtcgcctctatcgagaccgacatcaccaacatgaggattctcatcatccctgatgcg
accaagatggacaggcgcggtctgaccgttgacgacatcgtcgagaaactcaacaagatc
aaggccgtccgcggtctggtcgagaagagtgccgtctccttcgacggacccaacaacgat
gttgcatgcaacatcatcatctcgtccgaccccgagaatcccgcgcctttcaccaaactg
caggagatgtacgaggccatcaagaacgccaggctcaagggagtcgagggcatcaagagg
gcactcatccaccctgaccccaagaccggtcagtacagcatcatcaccgagggaagcaac
ctgaaggagatcctgcaggtcgagggtgtagacgtggacaacgtcatgaccaactccatc
atcgagatcgcagacgtcttcggaatcgaggcggccaggaactctatcatccacgaggcc
acctctaccctgggcaacgcaggtctggatgtcgacgtcaggcacatcatgcttgtcgcg
gacctcatgaccaacgacggtaccgtaagggccatcggaaggaacggagtgtccggaaag
aagtcctctgtcctggcaagggcagccttcgagatcaccgccgcccacctgctgcacgca
gcaatggtcggagaggtcgacaaactcgagggagtgactgaaaacatcatcgtaggtcag
ccggtgaccttaggaaccggagcaatcaaactttattacgatcccaaagcaaacaaggag
gatattgaatga
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