Methanogenic archaeon ISO4-H5: AR505_0159
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Entry
AR505_0159 CDS
T04272
Name
(GenBank) diaminopimelate decarboxylase LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc00300
Lysine biosynthesis
marc00470
D-Amino acid metabolism
marc01100
Metabolic pathways
marc01110
Biosynthesis of secondary metabolites
marc01120
Microbial metabolism in diverse environments
marc01230
Biosynthesis of amino acids
Module
marc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AR505_0159
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AR505_0159
Enzymes [BR:
marc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AR505_0159
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMH93881
UniProt:
A0A110A243
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All DBs
Position
complement(173642..174904)
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AA seq
420 aa
AA seq
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MPMRDFESKDGRMVFAGMDVVDLADRFGTPCYVTDEQRLRENYRNVYKAFSKYMETEIHY
ACKANTNLAILRVLQQEGAGIDAVSIGEVRACLKAGFSPDKIMYTGVFVSTEELKQVAET
GVMINLDSVSEMERLAQIKPGAPVSFRITPGIGSGHGAKVITGNKGAKFGIPKDKVVETY
LRAQDLGLNPIGIHAHIGSGGQSVEPFVEEAEVLAELINQIGEAGIDLEFVDIGGGIGVP
YKPNEDEMDLGQMASEVTDVFEQNTNIKKIILEPGRYLICDATILLTRCNDVKDAGTKKY
IGVDAGFNTLIRPAMYDSFHYIQNGSKFGKACTSKFDIAGPICETGDYLGHDRVLPEPDE
GDVMVVYNAGAYGFSMSSNYNSRPLCAEVLVNNGEAELIREKEQIEEQWRHQIIPKRLMQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgagggatttcgagagcaaggacggccgtatggtcttcgccggcatggacgtc
gtcgacctggcagacaggttcggcaccccctgctacgtgaccgacgagcagaggctcagg
gagaactaccgcaacgtctacaaggcattctccaagtacatggagaccgagattcactac
gcctgcaaggccaacaccaacctcgccatcctgagggtactccagcaggagggagcaggt
atcgatgccgtctccatcggcgaggtcagggcctgcctcaaggccggattcagccctgac
aagatcatgtacaccggtgtcttcgtgagcaccgaggaactcaagcaggtggccgagacg
ggagtcatgatcaacctcgactccgtctccgaaatggaacgtctggcacagatcaagccg
ggagcgcccgtatccttcaggatcacccccgggatcggttccggacacggtgccaaggtc
atcaccggcaacaagggagccaagttcggcatccccaaggacaaggtcgtcgagacctac
ctgagagcccaggacctgggactcaaccccatcggaatccatgcccacatcggatccggc
ggccagagcgtcgaacccttcgtcgaggaggcggaggtcctggctgaactcatcaaccag
atcggcgaggccggcatcgacctcgagttcgtggacatcggaggaggaatcggagtcccc
tacaagcccaacgaggacgagatggatctgggacagatggcctccgaggtcaccgacgtg
ttcgagcagaacaccaatatcaagaagatcatcctcgagcccggaaggtacctcatctgc
gatgctaccatcctgctcaccaggtgcaacgacgtcaaggacgccggcaccaagaagtac
atcggagtcgacgcgggattcaacaccctcatcaggcccgccatgtacgattcgttccac
tacatccagaacggaagcaagttcggaaaggcctgcacctccaagttcgatatcgcggga
cccatctgcgaaaccggagactatctcggacacgacagggtgcttcccgagcccgacgag
ggcgatgtcatggtcgtctacaacgccggtgcatacggattctccatgagcagcaactac
aattccaggcccctctgcgcagaggtactcgtgaacaacggcgaggccgaactcatccgc
gagaaggaacagatcgaggagcagtggaggcaccagatcatccccaagaggctcatgcaa
tga
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