Methanogenic archaeon ISO4-H5: AR505_0810
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Entry
AR505_0810 CDS
T04272
Name
(GenBank) transcription initiation factor TFIIB Tfb
KO
K03124
transcription initiation factor TFIIB
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AR505_0810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marc03021
]
AR505_0810
Transcription machinery [BR:
marc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AR505_0810
Prokaryotic type
Archaeal type
TFB
AR505_0810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Lar_restr_allev
Sigma70_r4
Cas12f1-like_TNB
HTH_AsnC-type
DZR
Zn_ribbon_IS1595
Zn_ribbon_double
TackOD1
Ribosomal_S27e
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AMH94531
LinkDB
All DBs
Position
complement(861478..862410)
Genome browser
AA seq
310 aa
AA seq
DB search
MVREKEKQETIEVCPECGSRHIVRDYERAELVCEDCGLVLDDNFIDQGAEWRAFDSEQSD
KRARTGSAMTFTIHDKGLSTEISWKNKDSYGKSIPTRNRAQMYRLRKWQKRVRVSNATER
NLAAALSELERLSSAMGLPRNVRETAALIYRKAVQKNLIRGRSIEGVVASSVYAACRQCG
VPRTLDEVSDFSRIKRKEIGRTYRFMTRELKLKLLPTKPQDYIQRFCSELKLSGNTQNKA
IEILKDATDKELTSGRGPTGVAAASIYIASILTNERRTQREVADVAGVTEVTIRNRYKEL
NEKLGMEITL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggttagggagaaagaaaaacaagagaccattgaagtatgccccgagtgcggaagccgc
cacattgtacgtgactacgagagggccgaacttgtctgtgaagactgcggattggtcctc
gatgacaacttcatcgaccagggtgccgaatggagggcatttgactctgagcagagtgat
aaaagggcccgtacgggttccgcaatgacctttaccatccacgacaagggactctcaacc
gagatctcttggaagaacaaggactcctacggaaagtccatccccaccaggaacagggcc
cagatgtacaggctcaggaaatggcagaagagggtccgtgtctccaacgcaaccgagagg
aacctcgcagcagcactttcagagctggagaggctgtcctccgccatgggactccccagg
aacgtcagggagaccgccgcgctcatctacaggaaagcagtccagaagaacctcatcagg
ggaaggtccatcgaaggcgtcgtcgcctcctccgtctatgcggcatgcaggcagtgcggt
gtccccaggaccctcgacgaggtttccgacttcagcaggatcaagaggaaggagatcgga
aggacctacaggttcatgacccgtgagctcaaactcaagctcctgcccaccaagccccag
gattacatccagaggttctgctccgagctgaagctcagcggtaacacccagaacaaggcg
atcgagatcctcaaggacgccaccgacaaggaactcacctccggaaggggacccaccggt
gtcgcagcagcttccatctacatcgcgtccatcctcaccaacgagaggaggacccagagg
gaggtcgccgatgtggcaggtgtcaccgaggtcaccatcaggaaccgttacaaagagctc
aacgagaagctcggaatggaaatcaccctttga
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