KEGG   Methanogenic archaeon ISO4-H5: AR505_0828
Entry
AR505_0828        CDS       T04272                                 
Name
(GenBank) replication factor C large subunit RfcL
  KO
K04800  replication factor C large subunit
Organism
marc  Methanogenic archaeon ISO4-H5
Pathway
marc03030  DNA replication
Brite
KEGG Orthology (KO) [BR:marc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AR505_0828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:marc03032]
    AR505_0828
DNA replication proteins [BR:marc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     AR505_0828
SSDB
Motif
Pfam: AAA RuvB_N AAA_22 Rad17 AAA_28 AAA_16 nSTAND3 AAA_assoc_2 RFC1 AAA_24 AAA_5 AAA_17 AAA_18 RNA_helicase DUF6108 DNA_pol3_delta AAA_33 Trypan_PARP
Other DBs
NCBI-ProteinID: AMH94549
UniProt: A0A0X8V0U9
LinkDB
Position
complement(876829..878310)
AA seq 493 aa
MSADDWTEKYRPQSLKDIVGNPTSAESMRQWALSWEKGIPKFRAMVLIGTPGIGKTSAAE
ALARDMGWGIVEMNASDQRTGPAIENIAGRAAIFNSFGDDGNFKSTKEGGMKLIVLDEAD
SLYGNADRGAMPAIMDLVRHSKQPVILICNDFYGLSKKSSAIKTETYQITFRKPQTASIE
KVLMKICAKEHAHVEADAIHIIAENADGDLRAAVRDLQSLVLGYGDVTAEMAKALGQRES
RSDMYEFIGALLRKRDAEKARQLLRECDVDPPTVELWIDENLPAHCASRSDLAAAYDALS
KADVHLGRVSKRMYYGLWKYASDMMVDGIVNSLKTPLSGFARVNFPNYLSKMSRSRSSRQ
TRKDLADKLCVITHTSANRVLNESMDYFRTMCINDVGFRVTLVREADLEADELAFLMGCK
IDDKRIKTAMDLAHPPEPKEKKISSRSKKAAEPTPAEKPKEAPAPAPEPKAETPEPKPEP
KPVDRRQKSLFDF
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagtgcggacgactggacggagaaatacaggccccagagcctgaaggacatagtgggc
aatcccacctccgccgaatccatgcgccagtgggccctctcctgggagaagggcattccc
aagttccgcgccatggtcctcataggtactcccggcatcgggaagacctcggctgccgaa
gcgctcgcccgcgatatgggctggggcatcgtcgagatgaatgcatccgatcagaggacg
ggtcccgccatcgagaacatcgccggcagggccgccatcttcaacagcttcggcgacgac
ggaaacttcaagagcaccaaagagggcgggatgaagctcatcgtcctcgacgaggcggac
agcctctacggcaacgcggaccgcggagcaatgcccgccatcatggatctcgtccgccat
tccaaacagcctgttattctcatctgcaacgatttctacggactctccaaaaagagctcc
gccatcaagaccgagacctatcagatcacattcaggaagccgcagaccgcttccatcgag
aaggtcctcatgaagatctgcgccaaggagcatgcccatgtggaggctgacgccatccac
atcatcgcggagaacgcggacggagacctccgtgccgcggtcagggatctgcagtccctc
gttctcggatacggggatgtcaccgccgagatggccaaggccctcggtcagagggaatcc
cgttccgacatgtacgagttcatcggcgccctcctcaggaagcgcgatgcggagaaggca
cgtcagctcctgagggaatgcgatgtcgatccccctacggttgaattatggatcgacgag
aacctccccgcacactgtgccagccgttcggatctcgcagcagcgtatgacgctctctcg
aaggccgacgtacacctcggaagggtcagcaaacgcatgtattacggcctttggaagtat
gcgagcgacatgatggtggacggcatcgtgaacagcctgaagacgcccctttcaggcttc
gcaagggtgaatttcccgaactatctctctaagatgtcccgctcccgctcctccaggcag
accaggaaggacctggcggacaaactctgcgtcattactcatacatcagctaacagagtg
ctcaacgaatccatggactacttcaggaccatgtgcatcaacgatgtcggattccgtgtg
accctcgtccgcgaagcagatctcgaagcggacgaactcgcattcctgatgggatgcaag
atcgacgataagcgcatcaagacggcgatggatctggcacatccgcccgagcccaaggag
aagaagatctcctcccgttccaagaaggccgccgaacccacacctgcggagaaaccaaag
gaggcacctgcccccgctcccgaacccaaagcggaaaccccggagcccaaaccagaacct
aaacccgtcgaccgccgccagaagagcctcttcgatttctga

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