Methanogenic archaeon ISO4-H5: AR505_1337
Help
Entry
AR505_1337 CDS
T04272
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR505_1337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marc03019
]
AR505_1337
03009 Ribosome biogenesis [BR:
marc03009
]
AR505_1337
Enzymes [BR:
marc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AR505_1337
Messenger RNA biogenesis [BR:
marc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR505_1337
Ribosome biogenesis [BR:
marc03009
]
Prokaryotic type
rRNA helicases
AR505_1337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
AAA_19
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMH95052
UniProt:
A0A0X8V1P9
LinkDB
All DBs
Position
complement(1428505..1429962)
Genome browser
AA seq
485 aa
AA seq
DB search
MSAEVAGCCSDQVIHMISKFTKLGLSEDLAKALDEMGWEEPSPIQQEAVPFGLNGYDLIA
QAQTGTGKTGAFGSIIISNIPSEQQKPSAIVLAPTRELAVQVSEELNKMAAYTGHVCVAI
YGGARIERQVDELEAGCDIVAGTPGRVRDMIERGYLDLTTIKVIVMDESDRMLDMGFIDD
IEFIFKACPEKRQMLMFSATMPEDIKRLASDYMRKPKEINVSKDDIPLDLIDAYYISVGR
RNKSWALTRILDIDKPKALIFCQTIKMVDTLEQRLKQYNYKVEAIHGDMAQGKREKVMND
FRSGKTDLLIATDVAARGIDIDDINYVINYDMPEQIDTYIHRIGRTGRAGNRGTAVSFVT
SEEEFLIREFELRTGIKIERRDVPEAEEGARDTIRKVVDYDQLSDPFGMVTFSINLGKKD
GLGKVKLADHINKIGHIMDAAIGKINLGEEESTVEVHRDFGNRMLMDVPKVKYRGKKVIV
KVIER
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaagtcgcaggctgttgttcagatcaagtgattcatatgatctccaaattc
accaaactcggattatccgaggacctagcaaaagcattggatgagatgggatgggaggag
ccgtcccccatccagcaggaagccgtcccctttggactcaacggatacgatctcatcgca
caggcacagaccggtaccggtaagaccggagcattcggatccatcatcatttccaacatt
ccctctgagcagcagaagcccagcgcaatcgtactcgcacccaccagggagctggccgtg
caggtctccgaggagctcaacaagatggccgcatacaccggtcatgtctgcgtcgccatc
tacggaggagcacgcatcgagaggcaggtcgacgagctggaggccggatgcgatatcgtg
gccggaacccccggacgtgtcagggacatgatcgagcgcggatacctcgacctcaccacc
atcaaggtcatcgttatggacgagtcggaccgcatgctcgacatgggtttcatcgacgac
atcgagttcatattcaaagcctgccccgagaagcgccagatgctgatgttctccgccacg
atgcccgaggacatcaagaggctcgcatccgattacatgaggaaacccaaggagatcaac
gtctccaaggacgacatccccctcgacctcatcgatgcatattacatcagcgtcggcagg
aggaacaagtcctgggccctcacccgtatcctcgacatcgacaagcccaaggcgctcatc
ttctgtcagaccatcaagatggtcgacaccctcgaacagaggctcaagcagtacaactac
aaggtggaggccatccacggagacatggcacagggcaagagggagaaggtcatgaacgac
ttcaggagcggcaagaccgacctcctcatcgccaccgatgtcgccgccaggggtattgac
atcgatgacatcaactacgtcatcaactacgacatgcccgagcagatcgacacctacatc
cacaggatcggaaggaccggaagggccggaaacaggggtaccgcagtatccttcgtcacc
tcggaggaggagttcctcatccgtgagttcgagctcaggaccggaatcaagatcgagagg
agggacgttcccgaggcagaagagggtgcccgcgacaccatcaggaaggtcgtcgattac
gatcagctctcagatcccttcggaatggtcaccttcagcatcaacctcggaaagaaggac
ggtctcggaaaggtcaaactcgccgaccacatcaataagatcggccacatcatggacgca
gctatcggaaagatcaacctcggggaggaggaatccaccgtcgaggtccaccgcgatttc
ggcaaccgcatgctgatggatgtccccaaggtcaagtacaggggaaagaaggtcatcgtc
aaggtcatcgagaggtga
DBGET
integrated database retrieval system
