Methanogenic archaeon ISO4-H5: AR505_1642
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Entry
AR505_1642 CDS
T04272
Name
(GenBank) ribulose bisphosphate carboxylase RbcL
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc00630
Glyoxylate and dicarboxylate metabolism
marc00710
Carbon fixation by Calvin cycle
marc01100
Metabolic pathways
marc01110
Biosynthesis of secondary metabolites
marc01120
Microbial metabolism in diverse environments
marc01200
Carbon metabolism
Module
marc_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AR505_1642
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
AR505_1642
Enzymes [BR:
marc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
AR505_1642
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AMH95357
UniProt:
A0A0X8V2G9
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All DBs
Position
complement(1762368..1763609)
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AA seq
413 aa
AA seq
DB search
MGNYSYMALGEEIDKDAYVVCKYRVTTDLPMEKAAEAIAAEQSTGTWTGISTLNDEVFTK
YAAKVTAIDGDMVTIAFPEEDFSIRVGAVPQILSVISGNLYGLSALKGVRLEDVEFPKGI
LKQYQGPKFGDAGLREILHRPEKPLVGTIVKPKIGLSPKDTAKYIYEAGSGGLTNGKDDE
TLVDQAFCPIEDRTKAVAEALDRLREEGHYMVHAINISTNGQDVRELAEDVQKWGASQLM
IDVLTCGYGAIQAVAEDPKIKVPIHVHRTMHAAMTKDPTNGISMRVIAKLVRMCGGDALH
IGTLGVGKMEGAITEGKQNQLACQSDDVPYKKVMPVCSGGMYPGIVPAVIKAAGSNNLQI
QAGGGVAGHPEGVRAGAMAMCQAVDSAFEGVDIEKYAETHHELRLALDRWGTK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactattcctacatggcattgggcgaggagattgacaaagacgcatacgtagtc
tgcaagtatcgtgtgaccacggaccttccgatggagaaggccgcggaggctatcgcggca
gagcagtccaccggaacctggaccggcatctccactctgaatgacgaggtattcaccaaa
tacgcagccaaggtcaccgccatcgacggcgacatggtgaccatcgccttccctgaggag
gatttcagcatcagggtgggtgcagttcctcagatcctttctgtgatctccggaaacctc
tacgggctcagcgcgctcaaaggcgtcagactggaggacgtggagttccccaaaggcatc
ctcaagcagtatcagggccccaagttcggcgacgccggactgagggagatcctgcaccgc
cccgagaaacccctggtcggcaccatcgtgaagcccaagatcggactctctcccaaggac
accgccaagtacatctacgaggcaggcagcggagggctcactaacggcaaggacgacgag
actctggtggaccaggcgttctgccccatcgaggaccgtaccaaggccgtcgccgaggcc
cttgacaggctgagggaggagggccactacatggtccacgccatcaacatcagcaccaac
ggacaggacgtcagggagctggcggaggatgtccagaaatggggtgcttcgcagctcatg
atcgacgtgctcacctgcggatacggggccattcaggccgttgccgaggatcccaagatc
aaggtcccgatccacgtccacaggaccatgcacgcggccatgaccaaggacccgaccaac
ggaatttccatgagagtcattgccaagctcgtccgcatgtgcggaggagacgccctccac
atcggtactctcggagtgggcaagatggagggggctatcaccgaagggaagcagaaccag
ctcgcctgccagtccgacgacgtcccctacaagaaggtcatgcccgtatgctcgggagga
atgtaccccggcattgtcccggcggtcatcaaggcggccggatccaacaacctgcagatc
caggcgggaggcggagtcgcaggtcaccctgagggtgtcagagcaggtgcaatggcaatg
tgccaggcagtcgattccgcattcgagggagtggacatcgagaagtacgccgagacccat
cacgagctcaggctcgcactcgacaggtggggtaccaaatga
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