Methanogenic archaeon ISO4-H5: AR505_1662
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Entry
AR505_1662 CDS
T04272
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
marc
Methanogenic archaeon ISO4-H5
Pathway
marc03022
Basal transcription factors
marc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AR505_1662
09124 Replication and repair
03420 Nucleotide excision repair
AR505_1662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marc03021
]
AR505_1662
03036 Chromosome and associated proteins [BR:
marc03036
]
AR505_1662
03400 DNA repair and recombination proteins [BR:
marc03400
]
AR505_1662
Enzymes [BR:
marc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AR505_1662
Transcription machinery [BR:
marc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AR505_1662
Chromosome and associated proteins [BR:
marc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AR505_1662
DNA repair and recombination proteins [BR:
marc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AR505_1662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
AAA_30
KOW6_SPT51-2
PhoH
AAA_34
SLFN-g3_helicase
ATPase
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
AMH95377
UniProt:
A0A0X8V087
LinkDB
All DBs
Position
complement(1780959..1782845)
Genome browser
AA seq
628 aa
AA seq
DB search
MTFPDYFPYTHRPGQAEMIRLVRDCVHDGRHLVVEAGTGTGKTVTALCAALEGTANSGRK
VIFLTRTKSQQRQIALEARAIADKADVVCIAIQGRGPATCPMMQNDRELVSGTSEELSKL
CATLKKGGTEAGTCSFFDNLDDAAVEACISFVRSSHPDPEEFREFCSVRGICPYEAAKRV
LPYANVVSAPYPFFFIPGIRTHFLEWMGIGERDAVVIMDEAHNLPNYLRDIQTYRMTQRA
LDLTMKEADENKDPEIYEGLTVKDAVTLVQDVLRDALEQFLRRDNDLIPPGYLSEEMMTR
LGMTTYGIRDMLMSMYTVGEAVADEKKRRRKLPRSHILTLARFLLAWISCGEGSHVYLVA
GGDNPYLEAYCLDASDAADPLLSCHSTVSMSGTLRPLDVYVKELSLYDPVTDSRPSPFPP
GNLKVGYVRDVSTKYDELNGSEDTYERLKRYVIDLVNCVHRSTAVFFPSYALMDRFIADG
VPGMLGREIYYEKSGMPQSELMEQMVDFKCSEGAVLFAVTGGRISEGLDFPGKELELAIL
VGIPYAKPSAKQDALVHYCQSRYGNGWDMAVKVPAVRKMRQAIGRLIRSETDRGVAVILD
RRAADLAGIDAEYMEDPVASVREFFVNG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccccgattattttccctatacgcacaggcccggccaggcggagatgatccgt
ctggtcagggactgtgtccatgacggccgccaccttgtggtcgaggcgggcaccggtacg
ggtaagaccgttactgcgctgtgcgccgcattagaaggcacagcaaactccggccgcaag
gtgattttcctcacccgcaccaagtcccagcagcgtcagatcgctctggaggcgagggcc
atcgcagataaggcggatgtggtttgtatcgctatccagggtcgcggtcccgccacctgc
cccatgatgcagaatgaccgcgaattggtgtcagggacctcagaggaactgtccaagctg
tgcgccacattgaagaagggcggcaccgaggcaggcacatgttccttcttcgacaatctg
gatgatgcggctgtcgaggcatgcatctccttcgtccgctcatcccatcccgatcccgag
gaattcagggagttctgttctgtccgcggtatctgtccctatgaggctgccaagcgcgtc
ctcccctatgccaacgtggtcagcgcaccttatccgttcttcttcatacccggcatccgc
acccatttcctggaatggatgggcatcggggagagggatgccgtcgtcatcatggacgag
gcccacaatctgcccaattacctgcgggacatccaaacataccgcatgacccagcgtgcc
ctggatctcaccatgaaggaggcggatgagaacaaggatccggagatctatgaagggctt
acggtgaaggatgcggtcaccctcgttcaggatgtcctgagggatgccctggagcagttc
ctccgcagggacaatgacctcatccccccgggatatctcagcgaggagatgatgacccgt
ctgggcatgaccacctacggaatacgggatatgctgatgtccatgtacacggtcggggag
gcggtggcagacgagaagaaacgcaggagaaagctcccccgttcccacatactcaccctg
gcccgtttcctcctggcatggatatcctgcggagagggctcacatgtctatctggtggcc
ggcggcgacaacccctatctggaagcgtactgcctcgatgccagcgatgcggcggatccg
ttattatcctgccattccaccgtgagcatgtccgggaccttgcgtcctctggacgtctac
gtgaaggagctgagtctttacgatccggtcaccgattcccgtccttccccgttccctccg
ggcaatctcaaggtgggttatgtccgtgacgtctccaccaaatacgatgagctgaacggc
agtgaggatacctacgagaggctcaagagatacgtcattgacctcgtgaactgcgttcac
agaagcacagcggtgttctttccatcgtatgccctcatggaccgtttcattgccgatggg
gtccccgggatgctgggaagggaaatctactacgagaagagcggtatgccccagtcggaa
ctcatggagcagatggtcgatttcaaatgcagcgagggtgcggtcctgttcgccgtgaca
ggcgggaggatcagcgaagggctcgacttccccggaaaggagctggagctcgctatcctg
gtcgggataccctatgcaaaaccctccgccaaacaggatgcattggtgcattactgtcag
agccgttacggtaacggatgggatatggctgtgaaagtgccagcggtcagaaagatgagg
caggccatcggacgtctgatccgttcggagaccgaccgtggagtggccgtgatcctcgac
cgcagggccgccgatctggcaggaatcgatgcggagtacatggaagaccccgttgcttcc
gtcagagagttcttcgtcaatggataa
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