KEGG   Methanogenic archaeon ISO4-H5: AR505_1798
Entry
AR505_1798        CDS       T04272                                 
Name
(GenBank) ribosomal protein L24 family
  KO
K15172  transcription elongation factor SPT5
Organism
marc  Methanogenic archaeon ISO4-H5
Brite
KEGG Orthology (KO) [BR:marc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AR505_1798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:marc03021]
    AR505_1798
   03019 Messenger RNA biogenesis [BR:marc03019]
    AR505_1798
Transcription machinery [BR:marc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     AR505_1798
  RNA polymerase I system
     AR505_1798
Messenger RNA biogenesis [BR:marc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     AR505_1798
SSDB
Motif
Pfam: Spt5-NGN KOW SH3_KIN17_C Ribosomal_uL24m-like KOW4_SPT5
Other DBs
NCBI-ProteinID: AMH95513
UniProt: A0A0X8V0K1
LinkDB
Position
complement(1912608..1913471)
AA seq 287 aa
MAENYSSPMFSGDSGAKDVHAGGLVTWDFQVAAGAADAVFSVSVVASDPENGPEWSVILY
DSQGAELWDYFRSKPEFKVAFPGSASKILRLEVICPRGARYDDRVDIEITVKSNAGTATQ
QFGACAKQSILILKTQIDQEKVVAQSLFAKASQGEKDVYAILSPVGLRGYVFVEGMNTDR
LQEKTREIKKARSFVDRKDISVAKGTHIPAETSIEEISSYLVPVSAVIGIEEGDLVELVN
GPFKGERARVQRIDQAKEEITVELVDAMVPIPVTVKGDSVKLIEKEN
NT seq 864 nt   +upstreamnt  +downstreamnt
atggcagagaactattcaagtccgatgttcagcggtgacagcggcgcgaaggacgtccac
gcaggcggcctcgtcacctgggatttccaggttgcggcaggtgcagcggatgcggtcttc
tccgtcagcgtcgtcgcatccgaccccgagaacggccccgagtggagcgtcatcctctac
gactcccagggtgcagaactttgggattacttccgctccaagccggagttcaaggtcgcc
ttccccggcagcgcttccaagatcctgaggctcgaggtcatctgccccaggggagccagg
tacgacgaccgcgtcgacatcgaaatcactgtcaaatccaatgccggcaccgccacccag
cagttcggcgcttgcgccaaacagtccatcctcatcctgaagactcagatcgatcaggag
aaggtcgtggcacagagcctgttcgcaaaggcctcgcagggcgagaaggatgtttacgca
atcctcagccccgtaggtctcaggggatacgtgttcgtcgagggtatgaacaccgaccgt
ctccaggagaagacccgcgagatcaagaaggcacgctcgttcgtcgacaggaaagatatc
agtgtagcaaaagggacccacatccccgccgagacttcgatcgaggagatcagctcatac
cttgtgcccgtctccgcagtcatcggaatcgaggaaggagacctcgtggagcttgtcaac
ggacccttcaagggcgagagggcaagggtccagaggatcgaccaggctaaagaggagatc
accgttgagctcgtcgatgccatggtccccattcccgttaccgttaaaggtgacagcgtc
aaattaatcgaaaaggagaattga

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