Methanogenic archaeon ISO4-H5: AR505_1798
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Entry
AR505_1798 CDS
T04272
Name
(GenBank) ribosomal protein L24 family
KO
K15172
transcription elongation factor SPT5
Organism
marc
Methanogenic archaeon ISO4-H5
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AR505_1798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marc03021
]
AR505_1798
03019 Messenger RNA biogenesis [BR:
marc03019
]
AR505_1798
Transcription machinery [BR:
marc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AR505_1798
RNA polymerase I system
AR505_1798
Messenger RNA biogenesis [BR:
marc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
AR505_1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
SH3_KIN17_C
Ribosomal_uL24m-like
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
AMH95513
UniProt:
A0A0X8V0K1
LinkDB
All DBs
Position
complement(1912608..1913471)
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AA seq
287 aa
AA seq
DB search
MAENYSSPMFSGDSGAKDVHAGGLVTWDFQVAAGAADAVFSVSVVASDPENGPEWSVILY
DSQGAELWDYFRSKPEFKVAFPGSASKILRLEVICPRGARYDDRVDIEITVKSNAGTATQ
QFGACAKQSILILKTQIDQEKVVAQSLFAKASQGEKDVYAILSPVGLRGYVFVEGMNTDR
LQEKTREIKKARSFVDRKDISVAKGTHIPAETSIEEISSYLVPVSAVIGIEEGDLVELVN
GPFKGERARVQRIDQAKEEITVELVDAMVPIPVTVKGDSVKLIEKEN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaactattcaagtccgatgttcagcggtgacagcggcgcgaaggacgtccac
gcaggcggcctcgtcacctgggatttccaggttgcggcaggtgcagcggatgcggtcttc
tccgtcagcgtcgtcgcatccgaccccgagaacggccccgagtggagcgtcatcctctac
gactcccagggtgcagaactttgggattacttccgctccaagccggagttcaaggtcgcc
ttccccggcagcgcttccaagatcctgaggctcgaggtcatctgccccaggggagccagg
tacgacgaccgcgtcgacatcgaaatcactgtcaaatccaatgccggcaccgccacccag
cagttcggcgcttgcgccaaacagtccatcctcatcctgaagactcagatcgatcaggag
aaggtcgtggcacagagcctgttcgcaaaggcctcgcagggcgagaaggatgtttacgca
atcctcagccccgtaggtctcaggggatacgtgttcgtcgagggtatgaacaccgaccgt
ctccaggagaagacccgcgagatcaagaaggcacgctcgttcgtcgacaggaaagatatc
agtgtagcaaaagggacccacatccccgccgagacttcgatcgaggagatcagctcatac
cttgtgcccgtctccgcagtcatcggaatcgaggaaggagacctcgtggagcttgtcaac
ggacccttcaagggcgagagggcaagggtccagaggatcgaccaggctaaagaggagatc
accgttgagctcgtcgatgccatggtccccattcccgttaccgttaaaggtgacagcgtc
aaattaatcgaaaaggagaattga
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