Methanogenic archaeon ISO4-H5: AR505_1808
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Entry
AR505_1808 CDS
T04272
Name
(GenBank) tRNA intron endonuclease EndA
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
marc
Methanogenic archaeon ISO4-H5
Brite
KEGG Orthology (KO) [BR:
marc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marc03016
]
AR505_1808
Enzymes [BR:
marc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
AR505_1808
Transfer RNA biogenesis [BR:
marc03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
AR505_1808
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
SET7_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
AMH95523
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All DBs
Position
complement(1918063..1919112)
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AA seq
349 aa
AA seq
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MSGELKDRSVFIYDVREASQTFSKGNFGYPMSGGALELDLVEAAFLLQLNRLEVVYRKKK
MTFNDLFDYASGLISDFDIKYIVFKDLRERGFIVKPESGSFDLRVYPRGMSPSKSAPLYM
VCAVSERSALNINEFMDEIAQSEDRGKQLLYGVVDEEGDLTYYKMAILDPEGKISPTERA
EPVAGKLISDRIFVFDSDEGERPHARAFYGKNMQGVLQLSLIEGCYLLGTGEIELSDRKG
KQLTREDLIAFGKKNQDEFDLRLKAYTDLRNRGLVVKTGFKYGTHFRVYEQSPDECHARY
LVHAVPGSVVAMWPDISRTVRLSGGVKKQILFCRVGKEIEYLEFKWFRP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgagctcaaagaccgctctgtgttcatctatgatgtcagggaggccagtcag
accttcagcaagggtaatttcggctatccgatgagcggaggcgccctggagctcgacctg
gtggaggcagcattcctcctccagctgaaccgtctggaggtcgtctaccgtaagaagaag
atgactttcaacgaccttttcgattacgcttccggactcatcagcgatttcgacatcaag
tacatcgtcttcaaggacctccgcgagaggggtttcatcgtgaaacccgaatccggcagt
tttgacctgagggtctacccccgcggcatgtccccttccaaatccgccccgctctacatg
gtgtgcgccgtttccgagcgttccgccctgaatatcaacgagttcatggacgagatcgcc
cagagcgaggaccgcggcaagcagctgctctacggagtggtcgacgaagaaggcgacctt
acttactacaagatggccatcctggatcccgaggggaagatctcccccaccgagagagcg
gaacccgtggccggaaagctgatctccgaccgtattttcgttttcgattcggacgagggg
gagaggccgcatgcacgtgccttctacggcaagaacatgcagggtgtactccagctctcg
ctcatcgagggatgctacctcctgggcacaggggagatcgaactctccgaccgcaagggg
aagcagcttacccgggaggatctcatcgctttcgggaagaagaaccaggacgaattcgat
ctccgtctgaaggcatacaccgatctcaggaaccgcggactcgtggtgaagaccggattc
aagtacgggacccatttcagggtatacgaacagtcccccgacgaatgccatgccaggtat
ctcgtccatgcagtacccgggtccgtcgtcgccatgtggcccgacatctcccgtacggtc
aggctctccggcggtgtgaagaaacagattctgttctgcagggtcggaaaagagatcgag
taccttgagttcaaatggttcagaccctaa
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