Marinomonas arctica: IBG28_03280
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Entry
IBG28_03280 CDS
T06902
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
mard
Marinomonas arctica
Pathway
mard00040
Pentose and glucuronate interconversions
mard01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IBG28_03280
Enzymes [BR:
mard01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
IBG28_03280
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
QNT06689
UniProt:
A0A7H1J873
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All DBs
Position
complement(712112..713260)
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AA seq
382 aa
AA seq
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MSLGQITPLAFQRTVDASTGTIVTQLTPNGSVCHRNYFYQKCFTEDGNKLLISANFDTNR
NYHLLDLQNESAIQLTEGKGDNVFGGFLTTQDDALIFVKNNKQLIRVDLKTQEHNVLYEV
ANGWVGYGTWVPNSDCTKVVAIEIKDTDYMSLDSWEKFAQFYHQKPRCRLISIDLNTGQR
TTIFEENIWLGHPLYRPNDDNTIAFCHEGPHDLVATRMWMIDESGDNMRKVHEQDDDESC
THEFFVPDGSKMMFVSYRPHMDKRQLCSVDAQTLAFKVEAEMPACSHLMSNHDGSLVVGD
GSGTPVDVSDHDGHTIQNDPNLYLLNLNTGDIRAIAEHNTSWTVLNGDRQINHPHPSFTP
DNKSVLYSSDVNGSPAVYLASL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttggacagatcacacctttggcatttcagcgcactgttgatgccagcactggc
accattgttactcagttaacaccgaacggtagcgtctgccaccgcaactatttttaccaa
aaatgcttcactgaagatggcaataaactgcttatctcggctaatttcgacacaaacaga
aactaccatcttttagatttacaaaatgaaagcgccatacaacttactgaaggcaaaggc
gataatgtctttggtggctttcttaccacacaagatgacgcgctgatctttgtgaaaaat
aacaagcagctcattcgtgttgatcttaaaacccaagaacataatgtgttgtatgaggtg
gctaatggctgggttggctacggcacttgggtacccaattcagattgtacgaaagtggtt
gcgattgaaatcaaagatacagattacatgagtttggacagttgggaaaaatttgcccag
ttttatcaccaaaagccacgttgccgtttgatctcaatcgatcttaacactggccaacgc
accacgatctttgaagaaaacatttggcttgggcatccgctgtatcggccaaatgacgac
aacaccattgcgttttgccatgaaggtccccacgatttagtggcaacacgcatgtggatg
attgacgaaagtggcgacaacatgcgcaaagtccatgagcaagatgacgatgagtcctgc
acccatgagtttttcgtaccagatggctcaaagatgatgtttgtgtcttatcgaccacat
atggataaacgccaactttgctccgtcgatgcgcaaacgctggcttttaaagtcgaagcg
gagatgcccgcctgcagtcatttgatgagtaaccatgacggtagtttggtcgtgggagac
ggctcaggtacgccagttgacgtatccgatcatgatggacacacgatacaaaacgatccc
aacctgtacctgctcaatctcaatacaggcgatattcgtgccattgccgaacacaacacc
agctggaccgtcttgaatggcgatcgtcaaatcaatcatcctcacccatcgtttacgcca
gacaataagtcggtactttacagctccgatgtaaacggttccccggcggtgtatttggcg
agcttataa
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