Marinomonas arctica: IBG28_04095
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Entry
IBG28_04095 CDS
T06902
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mard
Marinomonas arctica
Pathway
mard00300
Lysine biosynthesis
mard00470
D-Amino acid metabolism
mard01100
Metabolic pathways
mard01110
Biosynthesis of secondary metabolites
mard01120
Microbial metabolism in diverse environments
mard01230
Biosynthesis of amino acids
Module
mard_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IBG28_04095 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IBG28_04095 (lysA)
Enzymes [BR:
mard01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IBG28_04095 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QNT06836
UniProt:
A0A7H1J8M0
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All DBs
Position
885986..887239
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AA seq
417 aa
AA seq
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MDFFNYSGQTLHAENVALSDIASQYGTPCYVYSRATFERHYKAYADAFASHPTLICYAVK
ACSNIAILNVLARLGSGFDIVSIGELERVLKAGGEPSKIMFSGLGKQAVEMRRALEVGIH
CFNVESEAELYRLDQVAGEMGKVAPVSLRVNPDVDAKTHPYISTGLKENKFGIDIKDAVR
IYKIAHQLPHLNVMGVDCHIGSQLTELKPFLDTFDRLIGLVDELADAGITIKHLDLGGGL
GVRYRDEVPPEPADYAKLLLEKVKGKNFELAFEPGRSIAANAGVLLTQVEFLKCTPHKNF
AIIDGAMNDLIRPSLYGAWMNIVPVSLLPTPEGKRSYDLVGPICETGDFLGKDRELDIQA
GDLLAVRSAGAYGFTMASNYNSRNRAAEVMVDGDKTYLIRARETIEHQLAGEQILPD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggatttttttaattattcaggtcagactctgcatgcagagaatgttgcgttgtcagat
attgctagtcagtatggtacaccttgttacgtgtattctcgtgccacgtttgagcgtcat
tataaagcgtatgctgatgcctttgcgtcacatccgactttgatttgctatgccgtaaaa
gcctgttcaaatattgcgattttgaatgtattggctcgtttagggtctggctttgatatt
gtttctatcggtgaacttgagcgtgtgttaaaagcgggcggtgagccttcgaaaatcatg
ttttctggcttaggtaaacaagcggttgaaatgcgtagagctctagaagttggtattcat
tgcttcaatgttgagtccgaggcggagctataccgattagatcaagtcgctggtgaaatg
gggaaagtggcacctgtctctttgcgcgttaacccagacgtggatgcgaaaacacaccct
tatatttcaacaggcttgaaagaaaataagttcggtatcgatatcaaagacgcggtgcgt
atctataaaattgctcatcaattaccccatttaaatgtgatgggggttgattgtcacatt
ggttctcaattgacagaactcaaaccttttctggatacatttgatcgtttaattggtttg
gtggatgaattggcggacgctggtattactattaaacatctcgatctagggggaggatta
ggcgttcgttatcgtgatgaagtgccgccagagcctgctgattatgcgaagctgctactt
gaaaaagtaaaaggtaaaaattttgaactggcgtttgagcctggccgttctattgccgcc
aatgcaggtgttttattaacgcaagttgagtttttaaaatgcacgccgcacaaaaatttt
gccattattgatggtgcaatgaacgatttgattcgtccatctctatacggtgcttggatg
aatatcgtccctgtctctttattgccgacgcctgaaggtaagcgcagttatgatcttgtt
ggccctatttgtgagactggcgattttttaggtaaggatcgtgaacttgatattcaagcg
ggtgatcttttggcggttcgttcagctggggcttatggctttaccatggcatcaaactac
aatagccgtaatcgtgctgcggaagtgatggtagatggcgataaaacctatttgattcgt
gctcgtgaaacgattgaacatcagttagctggtgagcaaattttgccagactaa
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