Marinomonas arctica: IBG28_05320
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Entry
IBG28_05320 CDS
T06902
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mard
Marinomonas arctica
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mard03016
]
IBG28_05320
Enzymes [BR:
mard01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
IBG28_05320
Transfer RNA biogenesis [BR:
mard03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IBG28_05320
Prokaryotic type
IBG28_05320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QNT07060
UniProt:
A0A7H1J994
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All DBs
Position
1155034..1156128
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AA seq
364 aa
AA seq
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MNTEWRYAWSKPTVTGDLKTHVQDFYVEEQLGFEPDGKGEFCFVFIEKEGVNTDFLAKRL
AQMAGIAPDKVTYSGVKDRHACTRQWFCLHVLNREPDFSTIQEAFREPENVRVIAQLRHS
KKLRTGTHLANRFVIRLREINGDLDELEGRLNLIKQAGVPNYYGPQRFGINGNNLHNGKD
FVLKGRQSRRKLSKTESFWLSAIRSWCFNEALSDQVENGMWMRLCDGDIAQFQHKDEQFR
VKEVGALMHLNVMRGHISPVLPMISEGWEAGTGSQREQVMKHSLSDSAELVDALIAFDLS
RDSRLARLVPMNMAWELLREGERSAQLIVEFSLTKGCFATSILREMIDFTDKSAEKYHEN
FDRQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaatggcgatatgcttggtctaagccgactgtgactggggatttgaaaacc
cacgtacaagacttctatgtcgaagagcagttgggttttgagcctgatggtaaaggagag
ttttgttttgtctttatcgagaaggaaggggtgaataccgattttcttgccaaacgtttg
gctcagatggcaggcattgctcccgataaagtgacttacagtggcgtgaaggaccgtcat
gcttgtacacgccaatggttttgcttgcatgttttgaaccgtgaaccagatttttcgacc
attcaggaagcctttagagagcctgaaaatgttcgcgtgattgcacagctacgccattca
aaaaaattgcgtactggtacacatttagcgaatcgttttgtgattcgacttcgtgaaatc
aatggcgacttggatgagttagaagggcgtttaaatctgatcaagcaggcgggtgtgcct
aattattatggacctcaacgttttggcataaacggtaataatttgcacaacggcaaagac
tttgtcttaaaggggcggcaaagtcgccgtaaattatcgaaaacagaatccttctggtta
tcggcaattcgttcttggtgtttcaatgaggcattaagtgatcaggtggaaaacggtatg
tggatgcggttatgtgatggtgatattgcacagtttcagcataaagatgagcaatttcgc
gtaaaagaagtaggcgcactcatgcatctaaatgtgatgcgaggtcacatcagtcctgtg
ttgcctatgattagtgagggttgggaggccggtacaggctctcaacgtgagcaagtcatg
aaacactccttgtcagacagtgctgagctggtagacgctttgattgcctttgatctttcc
cgagacagccgactggcgcgtcttgtgcccatgaacatggcgtgggaattgcttagggag
ggggaaaggagcgcgcaattgattgttgagttttctttaaccaagggctgtttcgccacg
agtattttgcgtgagatgatagattttacggataagtcagctgagaaataccatgagaat
tttgatcgccaatga
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